RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PRSS23O95084 383 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 CD1AP06126 327 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 TGFB2P61812 414 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 HSD11B2P80365 405 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 FSTL1Q12841 308 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 RESTQ13127 1097 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 RAB39AQ14964 217 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 DACT2Q5SW24 774 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 CMTR2Q8IYT2 770 aaKnown RBP5.4□□□□□ -1.54
PMS1-203ENST00000409593 AMER2Q8N7J2 671 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 TTPALQ9BTX7 342 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 DDX56Q9NY93 547 aaKnown RBP5.4□□□□□ -1.54
PMS1-203ENST00000409593 USP25Q9UHP3 1055 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 PCDHB1Q9Y5F3 818 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 NOX1Q9Y5S8 564 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 HS3ST4Q9Y661 456 aa5.4□□□□□ -1.54
PMS1-203ENST00000409593 CFAP20Q9Y6A4 193 aaKnown RBP5.4□□□□□ -1.54
PMS1-203ENST00000409593 A0A1B0GTW7 788 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 DTNBO60941 627 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 FGFR4P22455 802 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 GCSHP23434 173 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 GUCY1B3Q02153 619 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 OCA2Q04671 838 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 SPDYE7PQ495Y7 208 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 VRK3Q8IV63 474 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 NLGN4YQ8NFZ3 816 aaPredicted RBP5.4□□□□□ -1.55
PMS1-203ENST00000409593 HOOK2Q96ED9 719 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 RNF31Q96EP0 1072 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 MRGPRX4Q96LA9 322 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 PACSIN1Q9BY11 444 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 TYW1Q9NV66 732 aaKnown RBP5.4□□□□□ -1.55
PMS1-203ENST00000409593 IP6K2Q9UHH9 426 aa5.4□□□□□ -1.55
PMS1-203ENST00000409593 MTO1Q9Y2Z2 717 aaKnown RBP5.4□□□□□ -1.55
PMS1-203ENST00000409593 TMEM191CA6NGB0 347 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 TMEM200CA6NKL6 621 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 ERN1O75460 977 aaKnown RBP5.39□□□□□ -1.55
PMS1-203ENST00000409593 ALDH1L1O75891 902 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 GPANK1O95872 356 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 CFIP05156 583 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 PDGFRBP09619 1106 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 SBK3P0C264 359 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 CT47B1P0C2W7 299 aaPredicted RBP5.39□□□□□ -1.55
PMS1-203ENST00000409593 MTHFD1P11586 935 aaKnown RBP5.39□□□□□ -1.55
PMS1-203ENST00000409593 INHBCP55103 352 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 NOMO3P69849 1222 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 TP53BP2Q13625 1128 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
PMS1-203ENST00000409593 NOMO2Q5JPE7 1267 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 TMEM240Q5SV17 173 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 FOXR2Q6PJQ5 311 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 TTC7BQ86TV6 843 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 CPA6Q8N4T0 437 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 HSPBAP1Q96EW2 488 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 MARS2Q96GW9 593 aaKnown RBP5.39□□□□□ -1.55
PMS1-203ENST00000409593 ADAM2Q99965 735 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 VRK1Q99986 396 aaPredicted RBP5.39□□□□□ -1.55
PMS1-203ENST00000409593 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 RNF181Q9P0P0 153 aa5.39□□□□□ -1.55
PMS1-203ENST00000409593 RAMP2O60895 175 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 CDKL5O76039 1030 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 ELANEP08246 267 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 CKBP12277 381 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 BMPR1AP36894 532 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 TLE1Q04724 770 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 CATIPQ7Z7H3 387 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 MRGPRGQ86SM5 289 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 LDLRAD3Q86YD5 345 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 ARHGEF19Q8IW93 802 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 ULK2Q8IYT8 1036 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 STAG1Q8WVM7 1258 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 CHFRQ96EP1 664 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 PRRX2Q99811 253 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 ALOXE3Q9BYJ1 711 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 WDR11Q9BZH6 1224 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 CYP4F11Q9HBI6 524 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 MAN1C1Q9NR34 630 aa5.38□□□□□ -1.55
PMS1-203ENST00000409593 CCDC78A2IDD5 438 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 LRRC14BA6NHZ5 514 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 MARCH11A6NNE9 402 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 AGFG2O95081 481 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 SPDEFO95238 335 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 SLC6A4P31645 630 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 DPTQ07507 201 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 TTF1Q15361 905 aaPredicted RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 KHDC1Q4VXA5 237 aaKnown RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 LAIR1Q6GTX8 287 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 TMEM132CQ8N3T6 1108 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 LCORLQ8N3X6 602 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 NSUN6Q8TEA1 469 aaKnown RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 NUP133Q8WUM0 1156 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 IKZF4Q9H2S9 585 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 SERHL2Q9H4I8 314 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 CALCOCO1Q9P1Z2 691 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 CDYLQ9Y232 598 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 WDR33Q9C0J8 1336 aaKnown RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 A0A087X1B8 175 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 B3GALT2O43825 422 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 PF4V1P10720 104 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 FCER1AP12319 257 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms