RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 EBF3Q9H4W6 596 aa6.19□□□□□ -1.42
R3HDM1-202ENST00000409478 PRDM11Q9NQV5 511 aa6.19□□□□□ -1.42
R3HDM1-202ENST00000409478 HEY2Q9UBP5 337 aa6.19□□□□□ -1.42
R3HDM1-202ENST00000409478 MAD2L2Q9UI95 211 aa6.19□□□□□ -1.42
R3HDM1-202ENST00000409478 COG5Q9UP83 839 aa6.19□□□□□ -1.42
R3HDM1-202ENST00000409478 CYP2D7A0A087X1C5 515 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 EXOC1LA0A1B0GW35 172 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 GSTTP1A0A1W2PQM5 241 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SMCO2A6NFE2 343 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC26A4O43511 780 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PDE8AO60658 829 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 TGDSO95455 350 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PORP16435 677 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 CA4P22748 312 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 AMPD1P23109 780 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 OXCT1P55809 520 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SPIDRQ14159 915 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SEPT7Q16181 437 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 DNAL1Q4LDG9 190 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 HERC4Q5GLZ8 1057 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 FAM47AQ5JRC9 791 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 ADGRA1Q86SQ6 560 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 ZBED8Q8IZ13 594 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 ZDHHC14Q8IZN3 488 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 NUP93Q8N1F7 819 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 KRT35Q92764 455 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SKA1Q96BD8 255 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SYT11Q9BT88 431 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PLK2Q9NYY3 685 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 DMTF1Q9Y222 760 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 TMED5Q9Y3A6 229 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 UBR2Q8IWV8 1755 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PYGMP11217 842 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 KRT15P19012 456 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 RPA3P35244 121 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 BTG3Q14201 252 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SIX1Q15475 284 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SGO2Q562F6 1265 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 TCERG1LQ5VWI1 586 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 LARGE2Q8N3Y3 721 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 OLIG1Q8TAK6 271 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SH3RF3Q8TEJ3 882 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PRICKLE1Q96MT3 831 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SETDB2Q96T68 719 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SIKE1Q9BRV8 207 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 OXCT2Q9BYC2 517 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 DNAJC18Q9H819 358 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 FAIMQ9NVQ4 179 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 TBC1D7Q9P0N9 293 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SPATA7Q9P0W8 599 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 ARPP21Q9UBL0 812 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 USP17L12C9JPN9 530 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 USP17L21D6R901 530 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SMIM22K7EJ46 135 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PDXKO00764 312 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 BAG2O95816 211 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 CDK4P11802 303 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 GRIA2P42262 883 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 KCNJ1P48048 391 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 RAB15P59190 212 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 GPC5P78333 572 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PLCB3Q01970 1234 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 PLOD1Q02809 727 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 RASA2Q15283 850 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SH3D19Q5HYK7 790 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 DUS1LQ6P1R4 473 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 RIPOR1Q6ZS17 1223 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 FNDC8Q8TC99 324 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 GAB3Q8WWW8 586 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 CORO1BQ9BR76 489 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 KLHL4Q9C0H6 718 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 SEPT11Q9NVA2 429 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 BIN2Q9UBW5 565 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 GRID1Q9ULK0 1009 aa6.18□□□□□ -1.42
R3HDM1-202ENST00000409478 KCPQ6ZWJ8 1503 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 A0A0G2JND7 137 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 POTEMA6NI47 508 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 BUD23O43709 281 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 ZNF862O60290 1169 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 ZBED4O75132 1171 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 TM7SF2O76062 418 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 MTA2O94776 668 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 COMTP21964 271 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 RFX1P22670 979 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 GTF2H1P32780 548 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 ADCY8P40145 1251 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 PDE1BQ01064 536 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 KNOP1Q1ED39 458 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 HYIQ5T013 277 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 GRAMD4Q6IC98 578 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 LVRNQ6Q4G3 990 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 RBM44Q6ZP01 1051 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 KCNK18Q7Z418 384 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 REXO1Q8N1G1 1221 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 HELBQ8NG08 1087 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 BTBD9Q96Q07 612 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 BRD8Q9H0E9 1235 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 UNC45AQ9H3U1 944 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms