RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 JPH2Q9BR39 696 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MRPL4Q9BYD3 311 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ABCB6Q9NP58 842 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 C1orf112Q9NSG2 853 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZHX1Q9UKY1 873 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CDV3Q9UKY7 258 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 RAB21Q9UL25 225 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 INTUQ9ULD6 942 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PTPRJQ12913 1337 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MCM3APO60318 1980 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 A0A0A6YYK5 440 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LOC102724159A0A0B4J2E5 919 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 IGKV6-21A0A0C4DH24 114 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 GAS2O43903 313 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 BUB1BO60566 1050 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ERLIN1O75477 346 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 TOM1L1O75674 476 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 KIF4AO95239 1232 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SNAI1O95863 264 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LGALS2P05162 132 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 TMEM253P0C7T8 217 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF286BP0CG31 522 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CYP11B1P15538 503 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CHRNB2P17787 502 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SCP2P22307 547 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 APLP1P51693 650 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 HUNKP57058 714 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 OSTNP61366 133 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PWP2Q15269 919 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CCDC70Q6NSX1 233 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZPBP2Q6X784 338 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ILDR2Q71H61 639 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 EXOC8Q8IYI6 725 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 THNSL1Q8IYQ7 743 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LRRC57Q8N9N7 239 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 OR5B17Q8NGF7 314 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 RFFLQ8WZ73 363 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PARK7Q99497 189 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ACO2Q99798 780 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LRRC1Q9BTT6 524 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 VTA1Q9NP79 307 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CTTNBP2NLQ9P2B4 639 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MORF4L1Q9UBU8 362 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CPA4Q9UI42 421 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC45A1Q9Y2W3 748 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PPME1Q9Y570 386 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CEP104O60308 925 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 RTN2O75298 545 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SASH3O75995 380 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 VNN1O95497 513 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TBC1D8O95759 1140 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PDE6CP51160 858 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SLC7A5Q01650 507 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 FMO1Q01740 532 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TFDP1Q14186 410 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CST9Q5W186 159 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SCARA3Q6AZY7 606 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 MAMDC4Q6UXC1 1216 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 C15orf39Q6ZRI6 1047 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PLEKHH3Q7Z736 793 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SYCE1Q8N0S2 351 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 HDAC7Q8WUI4 952 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 MAML3Q96JK9 1138 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PLEKHA4Q9H4M7 779 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 MINDY3Q9H8M7 445 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 RBM12Q9NTZ6 932 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 RNF14Q9UBS8 474 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 NOCTQ9UK39 431 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 AMFRQ9UKV5 643 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PCNTO95613 3336 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ADGRA2Q96PE1 1338 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SCN4AP35499 1836 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNFX1Q9P2E3 1918 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 A0A087WZ62 844 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM110-MUSTN1A8MSY1 372 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 H3BRB1 525 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 OGTO15294 1046 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 B4GALT5O43286 388 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CST3P01034 146 aaPredicted RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TUBBP07437 444 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ZBTB48P10074 688 aaPredicted RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 GPC5P78333 572 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CLDN10P78369 228 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 GCNT1Q02742 428 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ACVR2BQ13705 512 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 FAM110CQ1W6H9 321 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PRAMEF19Q5SWL8 479 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 BEND6Q5SZJ8 279 aaPredicted RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 EEF1DP3Q658K8 133 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CDCA2Q69YH5 1023 aaPredicted RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ENOSF1Q7L5Y1 443 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 NT5DC3Q86UY8 548 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 BRSK2Q8IWQ3 736 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ABRAQ8N0Z2 381 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 KRT222Q8N1A0 295 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 MMGT1Q8N4V1 131 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CEP120Q8N960 986 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 NPLOC4Q8TAT6 608 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 KCNN1Q92952 543 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms