RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 MRPL11Q9Y3B7 192 aaKnown RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 FIS1Q9Y3D6 152 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 TRPM3Q9HCF6 1732 aaPredicted RBP8.84□□□□□ -1
SNX13-201ENST00000409076 H7C0C1 242 aa8.83□□□□□ -1
SNX13-201ENST00000409076 KRT4P19013 534 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ATP5OP48047 213 aa8.83□□□□□ -1
SNX13-201ENST00000409076 EIF3BP55884 814 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 IL9RQ01113 521 aa8.83□□□□□ -1
SNX13-201ENST00000409076 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ARMC3Q5W041 872 aa8.83□□□□□ -1
SNX13-201ENST00000409076 C11orf63Q6NUN7 778 aa8.83□□□□□ -1
SNX13-201ENST00000409076 MTDHQ86UE4 582 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 SPATS2Q86XZ4 545 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 LRRC71Q8N4P6 559 aa8.83□□□□□ -1
SNX13-201ENST00000409076 PDCD7Q8N8D1 485 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 CCT6BQ92526 530 aa8.83□□□□□ -1
SNX13-201ENST00000409076 NLRP4Q96MN2 994 aa8.83□□□□□ -1
SNX13-201ENST00000409076 TRIM56Q9BRZ2 755 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 IMPG2Q9BZV3 1241 aa8.83□□□□□ -1
SNX13-201ENST00000409076 VAV3Q9UKW4 847 aa8.83□□□□□ -1
SNX13-201ENST00000409076 CACNA1SQ13698 1873 aa8.83□□□□□ -1
SNX13-201ENST00000409076 A6NNZ2 444 aa8.83□□□□□ -1
SNX13-201ENST00000409076 F8VP50 259 aa8.83□□□□□ -1
SNX13-201ENST00000409076 GJB1P08034 283 aa8.83□□□□□ -1
SNX13-201ENST00000409076 RPA3P35244 121 aaPredicted RBP8.83□□□□□ -1
SNX13-201ENST00000409076 SREBF1P36956 1147 aa8.83□□□□□ -1
SNX13-201ENST00000409076 MAGEA4P43358 317 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ABCG1P45844 678 aa8.83□□□□□ -1
SNX13-201ENST00000409076 QARSP47897 775 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 RGS7P49802 495 aa8.83□□□□□ -1
SNX13-201ENST00000409076 FMO1Q01740 532 aa8.83□□□□□ -1
SNX13-201ENST00000409076 STRN3Q13033 797 aa8.83□□□□□ -1
SNX13-201ENST00000409076 TRPC3Q13507 836 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ALCAMQ13740 583 aa8.83□□□□□ -1
SNX13-201ENST00000409076 BAATQ14032 418 aaPredicted RBP8.83□□□□□ -1
SNX13-201ENST00000409076 SLMAPQ14BN4 828 aa8.83□□□□□ -1
SNX13-201ENST00000409076 PSMD6Q15008 389 aa8.83□□□□□ -1
SNX13-201ENST00000409076 TUBB8Q3ZCM7 444 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ANKRD20A3Q5VUR7 823 aa8.83□□□□□ -1
SNX13-201ENST00000409076 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
SNX13-201ENST00000409076 TXNRD3NBQ6F5E7 133 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ZCCHC23Q6ZST2 131 aa8.83□□□□□ -1
SNX13-201ENST00000409076 PPM1NQ8N819 430 aa8.83□□□□□ -1
SNX13-201ENST00000409076 FBXL13Q8NEE6 735 aa8.83□□□□□ -1
SNX13-201ENST00000409076 DEPTORQ8TB45 409 aa8.83□□□□□ -1
SNX13-201ENST00000409076 SNF8Q96H20 258 aa8.83□□□□□ -1
SNX13-201ENST00000409076 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 LRRC37BQ96QE4 947 aa8.83□□□□□ -1
SNX13-201ENST00000409076 APOL6Q9BWW8 343 aa8.83□□□□□ -1
SNX13-201ENST00000409076 OSBPL8Q9BZF1 889 aa8.83□□□□□ -1
SNX13-201ENST00000409076 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.83□□□□□ -1
SNX13-201ENST00000409076 COL20A1Q9P218 1284 aa8.83□□□□□ -1
SNX13-201ENST00000409076 PHRF1Q9P1Y6 1649 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 LRP6O75581 1613 aa8.83□□□□□ -1
SNX13-201ENST00000409076 MEI4A8MW99 385 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ENO1P06733 434 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 ADRA1DP25100 572 aa8.83□□□□□ -1
SNX13-201ENST00000409076 NLRP11P59045 1033 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 NCALDP61601 193 aa8.83□□□□□ -1
SNX13-201ENST00000409076 RPS6P62753 249 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 SPIRE1Q08AE8 756 aa8.83□□□□□ -1
SNX13-201ENST00000409076 LIN9Q5TKA1 542 aa8.83□□□□□ -1
SNX13-201ENST00000409076 KRT39Q6A163 491 aa8.83□□□□□ -1
SNX13-201ENST00000409076 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.83□□□□□ -1
SNX13-201ENST00000409076 PYROXD1Q8WU10 500 aa8.83□□□□□ -1
SNX13-201ENST00000409076 CHURC1Q8WUH1 139 aa8.83□□□□□ -1
SNX13-201ENST00000409076 DCAF4Q8WV16 495 aa8.83□□□□□ -1
SNX13-201ENST00000409076 STMN2Q93045 179 aa8.83□□□□□ -1
SNX13-201ENST00000409076 NAP1L4Q99733 375 aaKnown RBP8.83□□□□□ -1
SNX13-201ENST00000409076 FBXO6Q9NRD1 293 aaPredicted RBP8.83□□□□□ -1
SNX13-201ENST00000409076 PHTF1Q9UMS5 762 aa8.83□□□□□ -1
SNX13-201ENST00000409076 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
SNX13-201ENST00000409076 NEU2Q9Y3R4 380 aa8.83□□□□□ -1
SNX13-201ENST00000409076 PITPNM2Q9BZ72 1349 aa8.82□□□□□ -1
SNX13-201ENST00000409076 PPFIA2O75334 1257 aa8.82□□□□□ -1
SNX13-201ENST00000409076 AVILO75366 819 aa8.82□□□□□ -1
SNX13-201ENST00000409076 MAN1A1P33908 653 aa8.82□□□□□ -1
SNX13-201ENST00000409076 COPS2P61201 443 aa8.82□□□□□ -1
SNX13-201ENST00000409076 Q3C1V9 767 aa8.82□□□□□ -1
SNX13-201ENST00000409076 TAF1BQ53T94 588 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 SIAH1Q8IUQ4 282 aa8.82□□□□□ -1
SNX13-201ENST00000409076 ZNF395Q9H8N7 513 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
SNX13-201ENST00000409076 IL1RAPL1Q9NZN1 696 aa8.82□□□□□ -1
SNX13-201ENST00000409076 TJP2Q9UDY2 1190 aa8.82□□□□□ -1
SNX13-201ENST00000409076 ZFP69BQ9UJL9 534 aa8.82□□□□□ -1
SNX13-201ENST00000409076 DISP2A7MBM2 1401 aa8.82□□□□□ -1
SNX13-201ENST00000409076 PODXLO00592 558 aa8.82□□□□□ -1
SNX13-201ENST00000409076 SNX3O60493 162 aa8.82□□□□□ -1
SNX13-201ENST00000409076 FAM155BO75949 473 aa8.82□□□□□ -1
SNX13-201ENST00000409076 AGTP01019 485 aa8.82□□□□□ -1
SNX13-201ENST00000409076 HLA-DRAP01903 254 aa8.82□□□□□ -1
SNX13-201ENST00000409076 IL1R1P14778 569 aa8.82□□□□□ -1
SNX13-201ENST00000409076 CDH8P55286 799 aa8.82□□□□□ -1
SNX13-201ENST00000409076 ITIH3Q06033 890 aa8.82□□□□□ -1
SNX13-201ENST00000409076 GABPAQ06546 454 aa8.82□□□□□ -1
SNX13-201ENST00000409076 BIRC2Q13490 618 aa8.82□□□□□ -1
SNX13-201ENST00000409076 DHX34Q14147 1143 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 TFDP1Q14186 410 aa8.82□□□□□ -1
SNX13-201ENST00000409076 THEMIS2Q5TEJ8 643 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms