RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 FAM187BQ17R55 369 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 MTHFD1LQ6UB35 978 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 KLHL7Q8IXQ5 586 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 MSL3Q8N5Y2 521 aaKnown RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 ZNF564Q8TBZ8 553 aaPredicted RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 UBE2Q2Q8WVN8 375 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 FDXACB1Q9BRP7 624 aaPredicted RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 CDT1Q9H211 546 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 CHORDC1Q9UHD1 332 aaPredicted RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 UMODL1Q5DID0 1318 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 MIF4GDA9UHW6 222 aaKnown RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 CST3P01034 146 aaPredicted RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 MMP3P08254 477 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 TMEM191BP0C7N4 346 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 MYBL2P10244 700 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 OSTNP61366 133 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 TFAMQ00059 246 aaKnown RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 DGKDQ16760 1214 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 CDR2LQ86X02 465 aaPredicted RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 IFT20Q8IY31 132 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 RBBP8NLQ8NC74 664 aaPredicted RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 RPS6KC1Q96S38 1066 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 RPF1Q9H9Y2 349 aaKnown RBP26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 KRIT1O00522 736 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 ASS1P00966 412 aaKnown RBP26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 TNNC2P02585 160 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 IQCF3P0C7M6 154 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 UNGP13051 313 aaPredicted RBP26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 PPFIA1Q13136 1202 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 SGSM1Q2NKQ1 1148 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 IFNLR1Q8IU57 520 aaPredicted RBP26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 GSPT2Q8IYD1 628 aaKnown RBP26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 UBL4BQ8N7F7 174 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 PPP1R16BQ96T49 567 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 AP1M1Q9BXS5 423 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 CARD9Q9H257 536 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 ACBD3Q9H3P7 528 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 CNOT8Q9UFF9 292 aaKnown RBP26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 TTC7AQ9ULT0 858 aaPredicted RBP26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 CNTN6Q9UQ52 1028 aa26.4■■□□□ 1.82
DNMT3A-206ENST00000406659 IL18RAPO95256 599 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 VTNP04004 478 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 HOXC6P09630 235 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 MYL6P60660 151 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 TRIM72Q6ZMU5 477 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 TRIM11Q96F44 468 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 ANKRD36BP1Q96IX9 119 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 UBXN6Q9BZV1 441 aa26.39■■□□□ 1.82
DNMT3A-206ENST00000406659 CCDC188H7C350 402 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 ZEB2O60315 1214 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 B4GALT4O60513 344 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 HEXIM1O94992 359 aaKnown RBP26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 HOXD8P13378 290 aaPredicted RBP26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 TNFRSF8P28908 595 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 GNA15P30679 374 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 TNFAIP2Q03169 654 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 GRIK4Q16099 956 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 CPA5Q8WXQ8 436 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 MYBL1P10243 752 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 COMTP21964 271 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 CLUL1Q15846 466 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 SCARA3Q6AZY7 606 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 MCOLN2Q8IZK6 566 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 CEP120Q8N960 986 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 AENQ8WTP8 325 aaKnown RBP26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 SCLT1Q96NL6 688 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 NAP1L3Q99457 506 aaPredicted RBP26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 WNT8AQ9H1J5 351 aa26.38■■□□□ 1.81
DNMT3A-206ENST00000406659 CSDE1O75534 798 aaKnown RBP26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 ECM2O94769 699 aaPredicted RBP26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 GLI1P08151 1106 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 MCF2P10911 925 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 NSFP46459 744 aaKnown RBP26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 ZNF157P51786 506 aaPredicted RBP26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 GUCY2DQ02846 1103 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 DCAF12L1Q5VU92 463 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 NAA35Q5VZE5 725 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 NLRP7Q8WX94 980 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 NIF3L1Q9GZT8 377 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 VIPAS39Q9H9C1 493 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 EPB41L5Q9HCM4 733 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 ST7Q9NRC1 585 aa26.37■■□□□ 1.81
DNMT3A-206ENST00000406659 GPR25O00155 361 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 THAP12O43422 761 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 RAD51CO43502 376 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 FGGP02679 453 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 CYP1A1P04798 512 aaPredicted RBP26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 MAP2K5Q13163 448 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 AMHR2Q16671 573 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 MORN1Q5T089 497 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 EFCAB13Q8IY85 973 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 CYFIP2Q96F07 1278 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 RNPC3Q96LT9 517 aaKnown RBP26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 AVENQ9NQS1 362 aaPredicted RBP26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 GDF3Q9NR23 364 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 ZSWIM8A7E2V4 1837 aa26.36■■□□□ 1.81
DNMT3A-206ENST00000406659 MANSC4A6NHS7 340 aaPredicted RBP26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 CXCL8P10145 99 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 EPHB4P54760 987 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 ZNF699Q32M78 642 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms