RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 IKZF4Q9H2S9 585 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SEL1LQ9UBV2 794 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 A0A0B4J269 797 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 LACTBL1A8MY62 500 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 TISP43B9A030 160 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 I3L4J1 428 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 PODXLO00592 558 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 MEFVO15553 781 aaPredicted RBP11.27□□□□□ -0.61
FAM49A-202ENST00000406434 TRAPPC3O43617 180 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 EFEMP2O95967 443 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 PIGRP01833 764 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 KCNE1P15382 129 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 SP100P23497 879 aaPredicted RBP11.27□□□□□ -0.61
FAM49A-202ENST00000406434 AFMP43652 599 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 BRCC3P46736 316 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 ACOT2P49753 483 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 CLCN4P51793 760 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 ASIC1P78348 528 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 ZP2Q05996 745 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 KCNA1Q09470 495 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 KYAT1Q16773 422 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 UPP1Q16831 310 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 TMC5Q6UXY8 1006 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 MAP4K3Q8IVH8 894 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.61
FAM49A-202ENST00000406434 NOC3LQ8WTT2 800 aaKnown RBP11.27□□□□□ -0.61
FAM49A-202ENST00000406434 POMGNT1Q8WZA1 660 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 HPS3Q969F9 1004 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 UROC1Q96N76 676 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 ACCSQ96QU6 501 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 TNMDQ9H2S6 317 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 CUEDC2Q9H467 287 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 ST6GALNAC4Q9H4F1 302 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 PLEKHA5Q9HAU0 1116 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 RXFP1Q9HBX9 757 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 CDH22Q9UJ99 828 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 KCNH3Q9ULD8 1083 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 EXOC7Q9UPT5 735 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 ATP6V1DQ9Y5K8 247 aa11.27□□□□□ -0.61
FAM49A-202ENST00000406434 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 TCHHQ07283 1943 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 GLUD1P00367 558 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 CASP1P29466 404 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 RPL9P32969 192 aaKnown RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 CASP5P51878 434 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 ITIH3Q06033 890 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 PPP2R3AQ06190 1150 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 ELAVL2Q12926 359 aaKnown RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 CBX2Q14781 532 aaPredicted RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 ATAT1Q5SQI0 421 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 RESP18Q5W5W9 173 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 SLFN12LQ6IEE8 588 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 SUSD6Q92537 303 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 KCNN1Q92952 543 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 POP1Q99575 1024 aaKnown RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 PHF7Q9BWX1 381 aaPredicted RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 BLZF1Q9H2G9 400 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 ADAM7Q9H2U9 754 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 EPHX3Q9H6B9 360 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 MAN1C1Q9NR34 630 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 KBTBD4Q9NVX7 518 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 SERTAD1Q9UHV2 236 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 AGO2Q9UKV8 859 aaKnown RBP11.26□□□□□ -0.61
FAM49A-202ENST00000406434 NUB1Q9Y5A7 615 aa11.26□□□□□ -0.61
FAM49A-202ENST00000406434 C5orf42Q9H799 3197 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 A0A1B0GVL5 298 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 TTC26A0AVF1 554 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 GUCY2FP51841 1108 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 POSTNQ15063 836 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 ENOX2Q16206 610 aaKnown RBP11.25□□□□□ -0.61
FAM49A-202ENST00000406434 PSMD5Q16401 504 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 CD300LGQ6UXG3 332 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 CEP57L1Q8IYX8 460 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 LNX1Q8TBB1 728 aaPredicted RBP11.25□□□□□ -0.61
FAM49A-202ENST00000406434 HVCN1Q96D96 273 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 RIPOR3Q96MK2 946 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 C7orf25Q9BPX7 421 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 CLSTN3Q9BQT9 956 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 STRA6Q9BX79 667 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 FGFBP2Q9BYJ0 223 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 TRIM9Q9C026 710 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 PCIF1Q9H4Z3 704 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 FNIP2Q9P278 1114 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
FAM49A-202ENST00000406434 CPSF3Q9UKF6 684 aaKnown RBP11.25□□□□□ -0.61
FAM49A-202ENST00000406434 CCDC195A0A1B0GUA6 201 aa11.24□□□□□ -0.61
FAM49A-202ENST00000406434 FRMD3A2A2Y4 597 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms