RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 DERAQ9Y315 318 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 C2CD2Q9Y426 696 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 C2orf71A6NGG8 1288 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 PODXLO00592 558 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 SMC2O95347 1197 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
GDPD3-202ENST00000406256 CYP2J2P51589 502 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 KCNC3Q14003 757 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 MORC3Q14149 939 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 NFIL3Q16649 462 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 KIAA0319Q5VV43 1072 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 DCLRE1AQ6PJP8 1040 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 PPM1EQ8WY54 764 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
GDPD3-202ENST00000406256 FAM212AQ96EL1 285 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 PDE11AQ9HCR9 933 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 RMND1Q9NWS8 449 aa17.24■□□□□ 0.35
GDPD3-202ENST00000406256 RBAKQ9NYW8 714 aaPredicted RBP17.24■□□□□ 0.35
GDPD3-202ENST00000406256 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
GDPD3-202ENST00000406256 ANO9A1A5B4 782 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 IL18RAPO95256 599 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 RPL9P32969 192 aaKnown RBP17.23■□□□□ 0.35
GDPD3-202ENST00000406256 BRCC3P46736 316 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 CASP4P49662 377 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 PMS1P54277 932 aaKnown RBP17.23■□□□□ 0.35
GDPD3-202ENST00000406256 TMEM132DQ14C87 1099 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 SNRNP35Q16560 246 aaKnown RBP17.23■□□□□ 0.35
GDPD3-202ENST00000406256 CAMK4Q16566 473 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 RTP2Q5QGT7 225 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 PDE12Q6L8Q7 609 aaKnown RBP17.23■□□□□ 0.35
GDPD3-202ENST00000406256 TMC7Q7Z402 723 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 MRPL43Q8N983 215 aaKnown RBP17.23■□□□□ 0.35
GDPD3-202ENST00000406256 XXYLT1Q8NBI6 393 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 VN1R2Q8NFZ6 395 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 NGRNQ9NPE2 291 aaKnown RBP17.23■□□□□ 0.35
GDPD3-202ENST00000406256 ENTPD7Q9NQZ7 604 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 MUC3AQ02505 3323 aa17.23■□□□□ 0.35
GDPD3-202ENST00000406256 I3L4J1 428 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 LINC01565O15544 149 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 GLP2RO95838 553 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 LTBRP36941 435 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 AARSP49588 968 aaKnown RBP eCLIP17.22■□□□□ 0.35
GDPD3-202ENST00000406256 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
GDPD3-202ENST00000406256 DSG1Q02413 1049 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 CYP24A1Q07973 514 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
GDPD3-202ENST00000406256 ISM2Q6H9L7 571 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 GOLGA5Q8TBA6 731 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 DDX27Q96GQ7 796 aaKnown RBP17.22■□□□□ 0.35
GDPD3-202ENST00000406256 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
GDPD3-202ENST00000406256 HOOK1Q9UJC3 728 aaKnown RBP17.22■□□□□ 0.35
GDPD3-202ENST00000406256 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.35
GDPD3-202ENST00000406256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.21■□□□□ 0.35
GDPD3-202ENST00000406256 ZNF233A6NK53 670 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 PPP1R3GB7ZBB8 358 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 PIRO00625 290 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 PER2O15055 1255 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 SPTLC1O15269 473 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 B3GAT3O94766 335 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 NR3C1P04150 777 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 NRIP1P48552 1158 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 MYBPC2Q14324 1141 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 DUSP6Q16828 381 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
GDPD3-202ENST00000406256 CENPPQ6IPU0 288 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 NT5DC4Q86YG4 428 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 ZC3H3Q8IXZ2 948 aaKnown RBP17.21■□□□□ 0.35
GDPD3-202ENST00000406256 RDH13Q8NBN7 331 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
GDPD3-202ENST00000406256 NCOR1O75376 2440 aa17.21■□□□□ 0.34
GDPD3-202ENST00000406256 BIN1O00499 593 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 TADA2AO75478 443 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 CXCL14O95715 111 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 FGFR3P22607 806 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 GLUD2P49448 558 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 MCCD1P59942 119 aaPredicted RBP17.2■□□□□ 0.34
GDPD3-202ENST00000406256 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
GDPD3-202ENST00000406256 PSMD6Q15008 389 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 C9orf57Q5W0N0 161 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 RBM23Q86U06 439 aaKnown RBP17.2■□□□□ 0.34
GDPD3-202ENST00000406256 GPR65Q8IYL9 337 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 C1orf127Q8N9H9 656 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 BEST2Q8NFU1 509 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 MICAL1Q8TDZ2 1067 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
GDPD3-202ENST00000406256 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 RXFP1Q9HBX9 757 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 STK39Q9UEW8 545 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 SIX4Q9UIU6 781 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 DOCK6Q96HP0 2047 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 C2orf16Q68DN1 1984 aa17.2■□□□□ 0.34
GDPD3-202ENST00000406256 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 TRIM49BA6NDI0 452 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms