RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 HVCN1Q96D96 273 aa19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 LRRC27Q9C0I9 530 aa19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 SFXN1Q9H9B4 322 aa19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 OLFML3Q9NRN5 406 aa19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 CPSF3Q9UKF6 684 aaKnown RBP19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 NUB1Q9Y5A7 615 aa19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 C5orf42Q9H799 3197 aa19.78■□□□□ 0.76
PTPRN2-204ENST00000404321 ADAM12O43184 909 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 TGM5O43548 720 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 PRPF6O94906 941 aaKnown RBP19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 FGFR3P22607 806 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 AFMP43652 599 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 AMPD3Q01432 767 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 ITIH3Q06033 890 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 KYAT1Q16773 422 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 SLFN12LQ6IEE8 588 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 SYCP3Q8IZU3 236 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 PIK3R5Q8WYR1 880 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 POMKQ9H5K3 350 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 FNIP2Q9P278 1114 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 AGO2Q9UKV8 859 aaKnown RBP19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 EXOC7Q9UPT5 735 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 PCDHB13Q9Y5F0 798 aa19.77■□□□□ 0.76
PTPRN2-204ENST00000404321 A0A1B0GVL5 298 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 TRAPPC3O43617 180 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 ADSSP30520 456 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 RPL9P32969 192 aaKnown RBP19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 CREMQ03060 361 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 JADE1Q6IE81 842 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 SAAL1Q96ER3 474 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 CLSTN3Q9BQT9 956 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 GDPD2Q9HCC8 539 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 SERTAD1Q9UHV2 236 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 STYXL1Q9Y6J8 313 aa19.76■□□□□ 0.75
PTPRN2-204ENST00000404321 LOC730098B7Z3J9 87 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 RFPL2O75678 378 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 NFICP08651 508 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 PFKFB1P16118 471 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 MCM4P33991 863 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 ATAT1Q5SQI0 421 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 RNF135Q8IUD6 432 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 CEP57L1Q8IYX8 460 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 ZSWIM2Q8NEG5 633 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 NOC3LQ8WTT2 800 aaKnown RBP19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 RIPOR3Q96MK2 946 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 C7orf25Q9BPX7 421 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 FAM213AQ9BRX8 229 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 MUTYHQ9UIF7 546 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 UBQLN1Q9UMX0 589 aaKnown RBP19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 ATP6V1DQ9Y5K8 247 aa19.75■□□□□ 0.75
PTPRN2-204ENST00000404321 MTHFRP42898 656 aa19.74■□□□□ 0.75
PTPRN2-204ENST00000404321 CUL4BQ13620 913 aa19.74■□□□□ 0.75
PTPRN2-204ENST00000404321 RSPO2Q6UXX9 243 aaPredicted RBP19.74■□□□□ 0.75
PTPRN2-204ENST00000404321 GPR65Q8IYL9 337 aa19.74■□□□□ 0.75
PTPRN2-204ENST00000404321 PCIF1Q9H4Z3 704 aa19.74■□□□□ 0.75
PTPRN2-204ENST00000404321 MAGEF1Q9HAY2 307 aa19.74■□□□□ 0.75
PTPRN2-204ENST00000404321 CCDC195A0A1B0GUA6 201 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 GOLGA8IPA6NC78 632 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 FAM86C2PA6NEL3 165 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 GOLGA8JA6NMD2 632 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 PPEF2O14830 753 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 CMA1P23946 247 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 OR1D2P34982 312 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 ALCAMQ13740 583 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 POSTNQ15063 836 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 ZBTB6Q15916 424 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 LILRA6Q6PI73 481 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 CRELD2Q6UXH1 353 aaPredicted RBP19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 GPR149Q86SP6 731 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 KREMEN2Q8NCW0 462 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 NECTIN4Q96NY8 510 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 CBWD1Q9BRT8 395 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 CDY1Q9Y6F8 540 aa19.73■□□□□ 0.75
PTPRN2-204ENST00000404321 ACTN4O43707 911 aaKnown RBP19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 SLFN14P0C7P3 912 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 TMEM132DQ14C87 1099 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 FAM26FQ5R3K3 315 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 CNNM4Q6P4Q7 775 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 PDXDC1Q6P996 788 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 ELMSAN1Q6PJG2 1045 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 ANKS3Q6ZW76 656 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 TMEM206Q9H813 350 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 MTRRQ9UBK8 725 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 DPP7Q9UHL4 492 aa19.72■□□□□ 0.75
PTPRN2-204ENST00000404321 PI4K2BG5E9Z4 385 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 XPOTO43592 962 aaKnown RBP19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 DCXO43602 365 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 ADRB2P07550 413 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 LRPAP1P30533 357 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 ARPP19P56211 112 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 SPATA1Q5VX52 437 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 ARMCX5Q6P1M9 558 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 STXBP4Q6ZWJ1 553 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 UNC13DQ70J99 1090 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 CD302Q8IX05 232 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 NELFCDQ8IXH7 590 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 BEST2Q8NFU1 509 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 PAGE5Q96GU1 130 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms