RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 LINC00301Q8NCQ3 95 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 STAMQ92783 540 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 ZNF707Q96C28 371 aaPredicted RBP14.51□□□□□ -0.09
SDF4-203ENST00000403997 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 KIF12Q96FN5 646 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 RHOBTB2Q9BYZ6 727 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 PRKD2Q9BZL6 878 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 RPF1Q9H9Y2 349 aaKnown RBP14.51□□□□□ -0.09
SDF4-203ENST00000403997 MTRRQ9UBK8 725 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 FBXW11Q9UKB1 542 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 SORCS3Q9UPU3 1222 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 CLUHO75153 1309 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 CITO14578 2027 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 A0A0B4J269 797 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 TTC26A0AVF1 554 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 MYMKA6NI61 221 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 LACTBL1A8MY62 500 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 SPTLC2O15270 562 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 GBP2P32456 591 aaPredicted RBP14.5□□□□□ -0.09
SDF4-203ENST00000403997 PPP2R3AQ06190 1150 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 MTMR3Q13615 1198 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 PPM1LQ5SGD2 360 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 ZBTB41Q5SVQ8 909 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 ZNF720Q7Z2F6 126 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 PDILTQ8N807 584 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 MSTO1Q9BUK6 570 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 MRPL44Q9H9J2 332 aaKnown RBP14.5□□□□□ -0.09
SDF4-203ENST00000403997 BACE2Q9Y5Z0 518 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 CDY1Q9Y6F8 540 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 TRIOO75962 3097 aa14.5□□□□□ -0.09
SDF4-203ENST00000403997 MTCL1Q9Y4B5 1905 aaKnown RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 A0A087X0B3 334 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 ANKRD63C9JTQ0 380 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 PAPLNO95428 1278 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 C8AP07357 584 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 IDEP14735 1019 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 GAP43P17677 238 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 MCM4P33991 863 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 ENOX2Q16206 610 aaKnown RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 FOXD4L6Q3SYB3 417 aaPredicted RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 VARS2Q5ST30 1063 aaKnown RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 AXDND1Q5T1B0 1012 aaPredicted RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 SLFN12LQ6IEE8 588 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 SLC39A4Q6P5W5 647 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 RSPO2Q6UXX9 243 aaPredicted RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 FOXD4L3Q6VB84 417 aaPredicted RBP14.49□□□□□ -0.09
SDF4-203ENST00000403997 MAP4K3Q8IVH8 894 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 UBALD2Q8IYN6 164 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 SPRYD3Q8NCJ5 442 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 DNAJC19Q96DA6 116 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 ASIC4Q96FT7 647 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 TBC1D7Q9P0N9 293 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 SEL1LQ9UBV2 794 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 TUBGCP4Q9UGJ1 667 aa14.49□□□□□ -0.09
SDF4-203ENST00000403997 C2orf16Q68DN1 1984 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 H7C4K7 107 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 SYN3O14994 580 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 CCL16O15467 120 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 XPOTO43592 962 aaKnown RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 N4BP1O75113 896 aaKnown RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 PPP6R2O75170 966 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 HNRNPA1P09651 372 aaKnown RBP eCLIP14.48□□□□□ -0.09
SDF4-203ENST00000403997 ZSCAN22P10073 491 aaPredicted RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 ARPP19P56211 112 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 ZBTB6Q15916 424 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 UVSSAQ2YD98 709 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 ADALQ6DHV7 355 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 GRASPQ7Z6J2 395 aaPredicted RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 SUGP1Q8IWZ8 645 aaKnown RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 TMEM130Q8N3G9 435 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 SLC7A14Q8TBB6 771 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 SUSD3Q96L08 255 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 SMOC2Q9H3U7 446 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 UBQLN1Q9UMX0 589 aaKnown RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 POLIQ9UNA4 740 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.48□□□□□ -0.09
SDF4-203ENST00000403997 VWA8A3KMH1 1905 aa14.48□□□□□ -0.09
SDF4-203ENST00000403997 TISP43B9A030 160 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 FAM189A1O60320 539 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 XYLBO75191 536 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 GCNT3O95395 438 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 YEATS4O95619 227 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 LRPAP1P30533 357 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 HOXA9P31269 272 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 ELF1P32519 619 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 ACOT2P49753 483 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 GUCY2FP51841 1108 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 POSTNQ15063 836 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 CTXN3Q4LDR2 81 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 JADE1Q6IE81 842 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 GET4Q7L5D6 327 aaPredicted RBP14.47□□□□□ -0.09
SDF4-203ENST00000403997 CD302Q8IX05 232 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 FBXL6Q8N531 539 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 APPL2Q8NEU8 664 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 POMGNT1Q8WZA1 660 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 HVCN1Q96D96 273 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 MYADMQ96S97 322 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 TSPAN18Q96SJ8 248 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms