RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 REXO1Q8N1G1 1221 aaKnown RBP10.31□□□□□ -0.76
NUP43-204ENST00000403890 RNF149Q8NC42 400 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 SLC5A5Q92911 643 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 SMARCD2Q92925 531 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 TMEM143Q96AN5 459 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 ZC3H10Q96K80 434 aaKnown RBP10.31□□□□□ -0.76
NUP43-204ENST00000403890 PAAF1Q9BRP4 392 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 C8orf33Q9H7E9 229 aaPredicted RBP10.31□□□□□ -0.76
NUP43-204ENST00000403890 C6orf50Q9HD87 102 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 CACNG4Q9UBN1 327 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 ESYT2A0FGR8 921 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 ADAMTS3O15072 1205 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TSPAN1O60635 241 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 PSMD10O75832 226 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 AKAP3O75969 853 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 LRG1P02750 347 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 VIPR2P41587 438 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 KPNA1P52294 538 aaPredicted RBP10.3□□□□□ -0.76
NUP43-204ENST00000403890 NPEPPSP55786 919 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 PSMC5P62195 406 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 NUCB1Q02818 461 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 SPIRE1Q08AE8 756 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TUSC3Q13454 348 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 PRSS36Q5K4E3 855 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TCEAL6Q6IPX3 200 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 SGMS1Q86VZ5 419 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 MFSD6LQ8IWD5 586 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 SMC5Q8IY18 1101 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 SYNPOQ8N3V7 929 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 CSGALNACT1Q8TDX6 532 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TCEAL3Q969E4 200 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 GJA10Q969M2 543 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TCEAL4Q96EI5 215 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 CPB2Q96IY4 423 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 CCDC136Q96JN2 1154 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 CORO1BQ9BR76 489 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 ZMYND12Q9H0C1 365 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 NXF3Q9H4D5 531 aaKnown RBP10.3□□□□□ -0.76
NUP43-204ENST00000403890 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
NUP43-204ENST00000403890 KLK14Q9P0G3 267 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 ANKFY1Q9P2R3 1169 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 PARP2Q9UGN5 583 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 MSRB2Q9Y3D2 182 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 NEUROG3Q9Y4Z2 214 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 TDRD15B5MCY1 1934 aaKnown RBP10.3□□□□□ -0.76
NUP43-204ENST00000403890 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 ASXL3Q9C0F0 2248 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 LAMA1P25391 3075 aa10.3□□□□□ -0.76
NUP43-204ENST00000403890 ARHGEF37A1IGU5 675 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 WDR27A2RRH5 827 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 ARNTLO00327 626 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 EXTL3O43909 919 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 KIF4AO95239 1232 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 CAVIN2O95810 425 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 GNA11P29992 359 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 ELF1P32519 619 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 PXNP49023 591 aaPredicted RBP10.29□□□□□ -0.76
NUP43-204ENST00000403890 USP11P51784 963 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 RTN1Q16799 776 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 WDR44Q5JSH3 913 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 PLA2G4FQ68DD2 849 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 APOA5Q6Q788 366 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.29□□□□□ -0.76
NUP43-204ENST00000403890 PDZD4Q76G19 769 aaPredicted RBP10.29□□□□□ -0.76
NUP43-204ENST00000403890 FERMT3Q86UX7 667 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 TCP11Q8WWU5 503 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 ZSWIM3Q96MP5 696 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 LRRC2Q9BYS8 371 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 TRPV4Q9HBA0 871 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 MTRRQ9UBK8 725 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 RBM8AQ9Y5S9 174 aaKnown RBP10.29□□□□□ -0.76
NUP43-204ENST00000403890 CDY1Q9Y6F8 540 aa10.29□□□□□ -0.76
NUP43-204ENST00000403890 ZMYM2Q9UBW7 1377 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 MYBPHLA2RUH7 354 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 SLC38A8A6NNN8 435 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 HEPACAM2A8MVW5 462 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 INO80B-WBP1J3KQ70 363 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 PRRG1O14668 218 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 CHADO15335 359 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 HYAL3O43820 417 aaPredicted RBP10.28□□□□□ -0.76
NUP43-204ENST00000403890 EDIL3O43854 480 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 ARF4P18085 180 aaPredicted RBP10.28□□□□□ -0.76
NUP43-204ENST00000403890 FGFR3P22607 806 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 CHMLP26374 656 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 RFC5P40937 340 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 CCR2P41597 374 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 SOX9P48436 509 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 PTENP60484 403 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 ELF2Q15723 593 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
NUP43-204ENST00000403890 PLK5Q496M5 336 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 B3GNT9Q6UX72 402 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 RALGPS2Q86X27 583 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms