RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TLDC1Q6P9B6 456 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 ZSWIM2Q8NEG5 633 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 CCHCR1Q8TD31 782 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 MAIP1Q8WWC4 291 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 TCP11Q8WWU5 503 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 SNF8Q96H20 258 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 POP1Q99575 1024 aaKnown RBP21.14■□□□□ 0.98
CCDC47-202ENST00000403162 PLCD4Q9BRC7 762 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 MXRA8Q9BRK3 442 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 TCP11X1B4DZS4 312 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 O00370 1275 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 TTC4O95801 387 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 P4HBP07237 508 aaKnown RBP21.14■□□□□ 0.97
CCDC47-202ENST00000403162 NCALDP61601 193 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 MAEAQ7L5Y9 396 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 MIER3Q7Z3K6 550 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 TBC1D1Q86TI0 1168 aaPredicted RBP21.14■□□□□ 0.97
CCDC47-202ENST00000403162 ACP6Q9NPH0 428 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 FGFR1OP2Q9NVK5 253 aa21.14■□□□□ 0.97
CCDC47-202ENST00000403162 ADRB2P07550 413 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 NQO1P15559 274 aaKnown RBP21.13■□□□□ 0.97
CCDC47-202ENST00000403162 IVDP26440 423 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 CAV1Q03135 178 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 PPIL2Q13356 520 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 CST9Q5W186 159 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 C1orf54Q8WWF1 131 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 CKAP2Q8WWK9 683 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 ASIC3Q9UHC3 531 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 COQ4Q9Y3A0 265 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 GJB6O95452 261 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 CLTAP09496 248 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 ALADP13716 330 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 CHKAP35790 457 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 RARRES1P49788 294 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 LRRC14Q15048 493 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 SH3D19Q5HYK7 790 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 ACAD10Q6JQN1 1059 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 OTUD6AQ7L8S5 288 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 HAUS6Q7Z4H7 955 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 DDX1Q92499 740 aaKnown RBP21.13■□□□□ 0.97
CCDC47-202ENST00000403162 SEMA4DQ92854 862 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 IWS1Q96ST2 819 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 EBF2Q9HAK2 575 aa21.13■□□□□ 0.97
CCDC47-202ENST00000403162 UNCXA6NJT0 531 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 MAP2K1Q02750 393 aaPredicted RBP21.12■□□□□ 0.97
CCDC47-202ENST00000403162 MKRN3Q13064 507 aaKnown RBP21.12■□□□□ 0.97
CCDC47-202ENST00000403162 MGARPQ8TDB4 240 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 HELQQ8TDG4 1101 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 GRK7Q8WTQ7 553 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 ECT2Q9H8V3 914 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 KIF3CO14782 793 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 GPC3P51654 580 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 BNIP1Q12981 228 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 KRT39Q6A163 491 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 NSMFQ6X4W1 530 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 GADL1Q6ZQY3 521 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 TIPINQ9BVW5 301 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 DONSONQ9NYP3 566 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 LGALS13Q9UHV8 139 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 ARL2BPQ9Y2Y0 163 aa21.12■□□□□ 0.97
CCDC47-202ENST00000403162 DDX39AO00148 427 aaKnown RBP21.11■□□□□ 0.97
CCDC47-202ENST00000403162 CXCL11O14625 94 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 KIF1CO43896 1103 aaKnown RBP21.11■□□□□ 0.97
CCDC47-202ENST00000403162 CREB1P16220 341 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 ITGB5P18084 799 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 NUGGCQ68CJ6 796 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 KIFAP3Q92845 792 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 CHST7Q9NS84 486 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 PRKAG3Q9UGI9 489 aa21.11■□□□□ 0.97
CCDC47-202ENST00000403162 SORBS3O60504 671 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 LYPLA2O95372 231 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 NCKAP1LP55160 1127 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 COPS2P61201 443 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 CLEC16AQ2KHT3 1053 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 SPATA21Q7Z572 469 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 TBC1D31Q96DN5 1066 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 TRAIPQ9BWF2 469 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 TMEM8AQ9HCN3 771 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 KCNH4Q9UQ05 1017 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 A0A0G2JLL6 359 aaPredicted RBP21.1■□□□□ 0.97
CCDC47-202ENST00000403162 A0A1B0GUA9 196 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 GAS8O95995 478 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 GJA5P36382 358 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 ITGA8P53708 1063 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 KCNJ2P63252 427 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 SNX1Q13596 522 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 SNRNP35Q16560 246 aaKnown RBP21.1■□□□□ 0.97
CCDC47-202ENST00000403162 NIPA1Q7RTP0 329 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 PRRT2Q7Z6L0 340 aaPredicted RBP21.1■□□□□ 0.97
CCDC47-202ENST00000403162 SLC17A8Q8NDX2 589 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 NT5C1BQ96P26 610 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.1■□□□□ 0.976e-6■■■□□ 15
CCDC47-202ENST00000403162 ADGRA3Q8IWK6 1321 aa21.1■□□□□ 0.97
CCDC47-202ENST00000403162 DHX15O43143 795 aaKnown RBP21.09■□□□□ 0.97
CCDC47-202ENST00000403162 MAPK4P31152 587 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 CBWD2Q8IUF1 395 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 PARD3BQ8TEW8 1205 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 DCLK3Q9C098 648 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 RXFP1Q9HBX9 757 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 KCNK9Q9NPC2 374 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms