RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 NRDE2Q9H7Z3 1164 aa29.03■■■□□ 2.24
CGREF1-204ENST00000402550 TAB2Q9NYJ8 693 aa29.03■■■□□ 2.24
CGREF1-204ENST00000402550 DERAQ9Y315 318 aa29.03■■■□□ 2.24
CGREF1-204ENST00000402550 C2CD2Q9Y426 696 aa29.03■■■□□ 2.24
CGREF1-204ENST00000402550 LRRC10BA6NIK2 292 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 TRIM49P0CI25 452 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 TRIM49CP0CI26 452 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 DLG4P78352 724 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 FANCCQ00597 558 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 TMEM132DQ14C87 1099 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 NAB2Q15742 525 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 PLEKHO2Q8TD55 490 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 CACTINQ8WUQ7 758 aaKnown RBP29.02■■■□□ 2.24
CGREF1-204ENST00000402550 KIF12Q96FN5 646 aa29.02■■■□□ 2.24
CGREF1-204ENST00000402550 XPOTO43592 962 aaKnown RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 B4GALT3O60512 393 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 AFPP02771 609 aaKnown RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 TMEM191BP0C7N4 346 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 GTF2H1P32780 548 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 COPB1P53618 953 aaKnown RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 MCCD1P59942 119 aaPredicted RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 CLDN10P78369 228 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 TFAMQ00059 246 aaKnown RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 KCNH2Q12809 1159 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 DUOXA2Q1HG44 320 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 VWA3BQ502W6 1294 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 PPP2R2DQ66LE6 453 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 JADE1Q6IE81 842 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 SPRED2Q7Z698 418 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 ANKRD36BP1Q96IX9 119 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 FAM193BQ96PV7 902 aaPredicted RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 POP1Q99575 1024 aaKnown RBP29.01■■■□□ 2.24
CGREF1-204ENST00000402550 VPS16Q9H269 839 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 MMRN2Q9H8L6 949 aa29.01■■■□□ 2.24
CGREF1-204ENST00000402550 WNT7BP56706 349 aa29.01■■■□□ 2.23
CGREF1-204ENST00000402550 DSC1Q08554 894 aa29.01■■■□□ 2.23
CGREF1-204ENST00000402550 ZBTB6Q15916 424 aa29.01■■■□□ 2.23
CGREF1-204ENST00000402550 SPOUT1Q5T280 376 aaKnown RBP29.01■■■□□ 2.23
CGREF1-204ENST00000402550 LRCH3Q96II8 777 aa29.01■■■□□ 2.23
CGREF1-204ENST00000402550 NDST4Q9H3R1 872 aa29.01■■■□□ 2.23
CGREF1-204ENST00000402550 DNAJB4Q9UDY4 337 aa29.01■■■□□ 2.23
CGREF1-204ENST00000402550 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.01■■■□□ 2.23
CGREF1-204ENST00000402550 N4BP1O75113 896 aaKnown RBP29■■■□□ 2.23
CGREF1-204ENST00000402550 TNNC2P02585 160 aa29■■■□□ 2.23
CGREF1-204ENST00000402550 TPM3P06753 285 aa29■■■□□ 2.23
CGREF1-204ENST00000402550 COLGALT2Q8IYK4 626 aa29■■■□□ 2.23
CGREF1-204ENST00000402550 SLC38A7Q9NVC3 462 aa29■■■□□ 2.23
CGREF1-204ENST00000402550 INTS13Q9NVM9 706 aa29■■■□□ 2.23
CGREF1-204ENST00000402550 ZC3H11AO75152 810 aaKnown RBP eCLIP28.99■■■□□ 2.23
CGREF1-204ENST00000402550 NFICP08651 508 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 GCLMP48507 274 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 UBASH3AP57075 661 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 CETN1Q12798 172 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 LMBRD2Q68DH5 695 aaPredicted RBP28.99■■■□□ 2.23
CGREF1-204ENST00000402550 EFCAB13Q8IY85 973 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 TGS1Q96RS0 853 aaKnown RBP28.99■■■□□ 2.23
CGREF1-204ENST00000402550 C17orf80Q9BSJ5 609 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 TMEM8AQ9HCN3 771 aa28.99■■■□□ 2.23
CGREF1-204ENST00000402550 UBQLN1Q9UMX0 589 aaKnown RBP28.99■■■□□ 2.23
CGREF1-204ENST00000402550 SZT2Q5T011 3432 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 BMPR1AP36894 532 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 ALDH7A1P49419 539 aaKnown RBP28.98■■■□□ 2.23
CGREF1-204ENST00000402550 MXI1P50539 228 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 ERVK-21P61565 698 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 TUSC3Q13454 348 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 MIIPQ5JXC2 388 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 FKBP15Q5T1M5 1219 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 KRT39Q6A163 491 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 GRPEL1Q9HAV7 217 aa28.98■■■□□ 2.23
CGREF1-204ENST00000402550 FSD2A1L4K1 749 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 CBFA2T2O43439 604 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 ALDH2P05091 517 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 GALTP07902 379 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 LAG3P18627 525 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 FMO5P49326 533 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 BCAR1P56945 870 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 PPP3CAQ08209 521 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 BIRC3Q13489 604 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 C1orf220Q5T0J3 134 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 KCNT2Q6UVM3 1135 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 BEST2Q8NFU1 509 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 C18orf25Q96B23 403 aaPredicted RBP28.97■■■□□ 2.23
CGREF1-204ENST00000402550 MTMR12Q9C0I1 747 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 AAASQ9NRG9 546 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 MTUS1Q9ULD2 1270 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 R3HCC1Q9Y3T6 440 aaKnown RBP28.97■■■□□ 2.23
CGREF1-204ENST00000402550 CDH23Q9H251 3354 aa28.97■■■□□ 2.23
CGREF1-204ENST00000402550 PBX3P40426 434 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 SOX4Q06945 474 aaPredicted RBP28.96■■■□□ 2.23
CGREF1-204ENST00000402550 SARM1Q6SZW1 724 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 APTXQ7Z2E3 356 aaKnown RBP28.96■■■□□ 2.23
CGREF1-204ENST00000402550 COLGALT1Q8NBJ5 622 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 TMEM175Q9BSA9 504 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 ZNF576Q9H609 170 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 IFNKQ9P0W0 207 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 RWDD3Q9Y3V2 267 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 PTPRJQ12913 1337 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 LGALS16A8MUM7 142 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 P4HA2O15460 535 aa28.96■■■□□ 2.23
CGREF1-204ENST00000402550 PHACTR2O75167 634 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms