RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ADAM28Q9UKQ2 775 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 PLAGL2Q9UPG8 496 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 FAN1Q9Y2M0 1017 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 KIF26AQ9ULI4 1882 aaPredicted RBP8.15□□□□□ -1.11
USP16-204ENST00000399976 DENND4CQ5VZ89 1909 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 TBC1D4O60343 1298 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 LPXNO60711 386 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 CSDE1O75534 798 aaKnown RBP8.14□□□□□ -1.11
USP16-204ENST00000399976 CXCL8P10145 99 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 RFX1P22670 979 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 NR2F2P24468 414 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 CASP1P29466 404 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 SCNN1GP51170 649 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 SMC1AQ14683 1233 aaKnown RBP8.14□□□□□ -1.11
USP16-204ENST00000399976 CD300LGQ6UXG3 332 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 GLIS3Q8NEA6 775 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 SPPL3Q8TCT6 385 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 GZF1Q9H116 711 aaPredicted RBP8.14□□□□□ -1.11
USP16-204ENST00000399976 TMEM8AQ9HCN3 771 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 PARP2Q9UGN5 583 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 NRP1O14786 923 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 TACC1O75410 805 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 DDHD2O94830 711 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 TNNC2P02585 160 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 CD44P16070 742 aaKnown RBP8.14□□□□□ -1.11
USP16-204ENST00000399976 SLC11A1P49279 550 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 RBP5P82980 135 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 ADAM9Q13443 819 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 MEA1Q16626 185 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 ZACNQ401N2 412 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 ELMSAN1Q6PJG2 1045 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 TRIM59Q8IWR1 403 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 FAM186BQ8IYM0 893 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 NELFBQ8WX92 580 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 DNAI2Q9GZS0 605 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 MIOSQ9NXC5 875 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 SCN1AP35498 2009 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 GREB1Q4ZG55 1949 aa8.14□□□□□ -1.11
USP16-204ENST00000399976 NUP210Q8TEM1 1887 aaPredicted RBP8.14□□□□□ -1.11
USP16-204ENST00000399976 LRRC10BA6NIK2 292 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 H7C4K7 107 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 EXOC3O60645 756 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 FGF18O76093 207 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 OAZ2O95190 189 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 C4BPAP04003 597 aaKnown RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 CCDC192P0DO97 292 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 KRT13P13646 458 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 HOXA9P31269 272 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 KCNC3Q14003 757 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 CDKAL1Q5VV42 579 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 C9orf57Q5W0N0 161 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 ANKRD40Q6AI12 368 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 JADE1Q6IE81 842 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 SASS6Q6UVJ0 657 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 APPL2Q8NEU8 664 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 CMASQ8NFW8 434 aaPredicted RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 ZNF668Q96K58 619 aaPredicted RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 ZMAT2Q96NC0 199 aaKnown RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 TTYH1Q9H313 450 aaPredicted RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 TMEM63CQ9P1W3 806 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 STXBP5LQ9Y2K9 1186 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 OBSL1O75147 1896 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 SOBPA7XYQ1 873 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 SOX1O00570 391 aaPredicted RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 PODXLO00592 558 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 CTNNB1P35222 781 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 VAMP7P51809 220 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 RNASELQ05823 741 aaKnown RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 USP41Q3LFD5 358 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 PUS10Q3MIT2 529 aaKnown RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 KIAA0319Q5VV43 1072 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 ANKS3Q6ZW76 656 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 EFCAB13Q8IY85 973 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 LPPQ93052 612 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 IQCDQ96DY2 449 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 TMEM169Q96HH4 297 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 FAM213AQ9BRX8 229 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 CYP3A43Q9HB55 503 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 DPP3Q9NY33 737 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 LCHNA4D1U4 455 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 OR6C75A6NL08 312 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 ITGB1P05556 798 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 AKAP5P24588 427 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 TNFSF9P41273 254 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 MATR3P43243 847 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP16-204ENST00000399976 TAF6P49848 677 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 ZNF445P59923 1031 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 GPM6BQ13491 265 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 CEP120Q8N960 986 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 HPS3Q969F9 1004 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 KIF12Q96FN5 646 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 AVENQ9NQS1 362 aaPredicted RBP8.13□□□□□ -1.11
USP16-204ENST00000399976 MTMR10Q9NXD2 777 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 MTRRQ9UBK8 725 aa8.13□□□□□ -1.11
USP16-204ENST00000399976 FBXL5Q9UKA1 691 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms