RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TRPV4Q9HBA0 871 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 TRIP11Q15643 1979 aa19.93■□□□□ 0.78
UFD1-202ENST00000399523 PKD1L2Q7Z442 2459 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 TTLL13PA6NNM8 815 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 PRRG1O14668 218 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 ZNF263O14978 683 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 ZNF806P0C7X5 589 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 ATF2P15336 505 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 ELF1P32519 619 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 ROR1Q01973 937 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 LRRC32Q14392 662 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 SF3A2Q15428 464 aaKnown RBP19.92■□□□□ 0.78
UFD1-202ENST00000399523 HEATR6Q6AI08 1181 aaKnown RBP19.92■□□□□ 0.78
UFD1-202ENST00000399523 C1orf228Q6PIY5 440 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 TCEAL8Q8IYN2 117 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 HSD17B14Q9BPX1 270 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 POLR3FQ9H1D9 316 aaPredicted RBP19.92■□□□□ 0.78
UFD1-202ENST00000399523 RXFP3Q9NSD7 469 aa19.92■□□□□ 0.78
UFD1-202ENST00000399523 PDCD11Q14690 1871 aaKnown RBP19.92■□□□□ 0.78
UFD1-202ENST00000399523 N4BP3O15049 544 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 TRAPPC3O43617 180 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 VIPR2P41587 438 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 RARRES1P49788 294 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 UPP1Q16831 310 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 CDCA2Q69YH5 1023 aaPredicted RBP19.91■□□□□ 0.78
UFD1-202ENST00000399523 PDZD4Q76G19 769 aaPredicted RBP19.91■□□□□ 0.78
UFD1-202ENST00000399523 CEP68Q76N32 757 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 MFSD6LQ8IWD5 586 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 LOXL4Q96JB6 756 aa19.91■□□□□ 0.78
UFD1-202ENST00000399523 RBM12Q9NTZ6 932 aaKnown RBP19.91■□□□□ 0.78
UFD1-202ENST00000399523 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 MARCH6O60337 910 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 CCNT1O60563 726 aaKnown RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 MOSPD3O75425 235 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 HOXB3P14651 431 aaPredicted RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 RPS6KB1P23443 525 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 CLCNKBP51801 687 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 BMP2KLQ5H9B9 411 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 WDR44Q5JSH3 913 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 CYP4A22Q5TCH4 519 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 STPG1Q5TH74 334 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 WDR5BQ86VZ2 330 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 NOSTRINQ8IVI9 506 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 SLFN12Q8IYM2 578 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 C12orf50Q8NA57 414 aaPredicted RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 UROC1Q96N76 676 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 AIFM3Q96NN9 605 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 PPP1R10Q96QC0 940 aaKnown RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 NAP1L4Q99733 375 aaKnown RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 EIF2AK1Q9BQI3 630 aaKnown RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 LSM14BQ9BX40 385 aaKnown RBP19.9■□□□□ 0.78
UFD1-202ENST00000399523 ARRDC1-AS1Q9H2J1 176 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 C2orf42Q9NWW7 574 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 INSL5Q9Y5Q6 135 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 NCANO14594 1321 aa19.9■□□□□ 0.78
UFD1-202ENST00000399523 KCNK5O95279 499 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 SEC24AO95486 1093 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 ACAP1Q15027 740 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 DGKKQ5KSL6 1271 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 Q6ZS52 159 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 POTEDQ86YR6 584 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 C3orf58Q8NDZ4 430 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 C8orf33Q9H7E9 229 aaPredicted RBP19.89■□□□□ 0.77
UFD1-202ENST00000399523 CYP4F11Q9HBI6 524 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 SNX14Q9Y5W7 946 aa19.89■□□□□ 0.77
UFD1-202ENST00000399523 I3L4J1 428 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 AXIN1O15169 862 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 BRCC3P46736 316 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 RAP1GAPP47736 663 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 EPHA5P54756 1037 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 PRPF4BQ13523 1007 aaKnown RBP19.88■□□□□ 0.77
UFD1-202ENST00000399523 KDF1Q8NAX2 398 aaPredicted RBP19.88■□□□□ 0.77
UFD1-202ENST00000399523 LEMD2Q8NC56 503 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 ZSCAN18Q8TBC5 510 aaPredicted RBP19.88■□□□□ 0.77
UFD1-202ENST00000399523 CSGALNACT1Q8TDX6 532 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 E2F7Q96AV8 911 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 ADPGKQ9BRR6 497 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 GPRC5CQ9NQ84 441 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
UFD1-202ENST00000399523 ZMIZ1Q9ULJ6 1067 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 KCNJ14Q9UNX9 436 aa19.88■□□□□ 0.77
UFD1-202ENST00000399523 HEPACAM2A8MVW5 462 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 CHADO15335 359 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 EPN2O95208 641 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 BAG4O95429 457 aaKnown RBP19.87■□□□□ 0.77
UFD1-202ENST00000399523 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.771e-14■■□□□ 12.5
UFD1-202ENST00000399523 CCDC6Q16204 474 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 GLRA4Q5JXX5 417 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 PLA2G2CQ5R387 149 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 TPGS2Q68CL5 300 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 IQCEQ6IPM2 695 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 UNQ6494/PRO21346Q6UXR6 183 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 ZBTB8OSQ8IWT0 167 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 HS6ST3Q8IZP7 471 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 ELMOD1Q8N336 334 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 CCDC43Q96MW1 224 aaKnown RBP19.87■□□□□ 0.77
UFD1-202ENST00000399523 CEP72Q9P209 647 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 GDAQ9Y2T3 454 aa19.87■□□□□ 0.77
UFD1-202ENST00000399523 MYBPHLA2RUH7 354 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms