RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ARL4CP56559 192 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 SLMAPQ14BN4 828 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 TXNRD3Q86VQ6 643 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 FBXO22Q8NEZ5 403 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 AKT1S1Q96B36 256 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 KIFC3Q9BVG8 833 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 DBR1Q9UK59 544 aaKnown RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 FAM47E-STBD1D6RA91 191 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 RHOBTB3O94955 611 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 CKMP06732 381 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 HADHAP40939 763 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 NDUFV1P49821 464 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 DSG4Q86SJ6 1040 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 ZNF558Q96NG5 402 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 NUP85Q9BW27 656 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 TLR8Q9NR97 1041 aaKnown RBP8.4□□□□□ -1.07
USP47-203ENST00000399455 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.07
USP47-203ENST00000399455 SYF2O95926 243 aaKnown RBP8.4□□□□□ -1.07
USP47-203ENST00000399455 ETFBP38117 255 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 GUCY2FP51841 1108 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 GEMIN4P57678 1058 aaKnown RBP8.4□□□□□ -1.07
USP47-203ENST00000399455 DEUP1Q05D60 604 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 RBL2Q08999 1139 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 PYROXD1Q8WU10 500 aa8.4□□□□□ -1.07
USP47-203ENST00000399455 UBR1Q8IWV7 1749 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 UBA6A0AVT1 1052 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 CAPN2P17655 700 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 MAP2K5Q13163 448 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 GRAMD1CQ8IYS0 662 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 ENOX1Q8TC92 643 aaKnown RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 UNC45AQ9H3U1 944 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 PPP2R2CQ9Y2T4 447 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 LZTS3O60299 673 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 ATP1A1P05023 1023 aaKnown RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 APBA1Q02410 837 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 SYT17Q9BSW7 474 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 GIMAP4Q9NUV9 329 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 KLHL14Q9P2G3 628 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 SPACA6W5XKT8 324 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 SLC9A3R1O14745 358 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 BRAFP15056 766 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 MX2P20592 715 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 DNAJB2P25686 324 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 PPM1AP35813 382 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 CAV1Q03135 178 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 DPYDQ12882 1025 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 GPATCH11Q8N954 259 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 RAPGEF5Q92565 580 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 C18orf8Q96DM3 657 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 FGD4Q96M96 766 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 C11orf70Q9BRQ4 267 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 POLR3CQ9BUI4 534 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 CHST12Q9NRB3 414 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 SUN2Q9UH99 717 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 RSPH14Q9UHP6 348 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 SYNPO2Q9UMS6 1093 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 ZBTB48P10074 688 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 PLA2G4FQ68DD2 849 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 MPZL3Q6UWV2 235 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 KRT35Q92764 455 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 SEZ6LQ9BYH1 1024 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 RPTORQ8N122 1335 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 NEURL4Q96JN8 1562 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 KPNA7A9QM74 516 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 RTN3O95197 1032 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 ALDH5A1P51649 535 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 ATG16L1Q676U5 607 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 ZNF438Q7Z4V0 828 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 ZNF564Q8TBZ8 553 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 APBB2Q92870 758 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
USP47-203ENST00000399455 PKP3Q9Y446 797 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 FAM205AQ6ZU69 1335 aa8.39□□□□□ -1.07
USP47-203ENST00000399455 CYB561D2O14569 222 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 B3GAT3O94766 335 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 CYP2C8P10632 490 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 BCAR1P56945 870 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 ATP2C1P98194 919 aaPredicted RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 RESTQ13127 1097 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 NAA35Q5VZE5 725 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 ADCK2Q7Z695 626 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 LRRC37BQ96QE4 947 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 RGL1Q9NZL6 768 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
USP47-203ENST00000399455 ZRANB2O95218 330 aaKnown RBP eCLIP8.38□□□□□ -1.07
USP47-203ENST00000399455 ANP32DO95626 131 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 SLC1A1P43005 524 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 ADGRF2Q8IZF7 708 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 CARNMT1Q8N4J0 409 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 CYP4F11Q9HBI6 524 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 RCOR1Q9UKL0 485 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 SLC30A1Q9Y6M5 507 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 NCAM2O15394 837 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 ACOT2P49753 483 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 LBRQ14739 615 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 SNRNP35Q16560 246 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 UNC45BQ8IWX7 931 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 NDEL1Q9GZM8 345 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms