RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 P4HA1P13674 534 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 PSMC3P17980 439 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 MCAMP43121 646 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 CDK17Q00537 523 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 PI16Q6UXB8 463 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMAD9-203ENST00000399275 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 MINDY2Q8NBR6 621 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 STOML2Q9UJZ1 356 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 NRXN1Q9ULB1 1477 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 KLHL33A6NCF5 533 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 KRT36O76013 467 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 SOX6P35712 828 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 ADAM17P78536 824 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 INPP5AQ14642 412 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 KLHL17Q6TDP4 642 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 DNAJC10Q8IXB1 793 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 GJA10Q969M2 543 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 C1orf112Q9NSG2 853 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 BAIAP2Q9UQB8 552 aa10.09□□□□□ -0.79
SMAD9-203ENST00000399275 COL3A1P02461 1466 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ALKQ9UM73 1620 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 AKAP10O43572 662 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 RHOBTB3O94955 611 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 JAK1P23458 1154 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ATP2B4P23634 1241 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SLC12A1Q13621 1099 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 PTPAQ15257 358 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ANO4Q32M45 955 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 RABL6Q3YEC7 729 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ASPRV1Q53RT3 343 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 LRRC8EQ6NSJ5 796 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 IYDQ6PHW0 289 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 TAB3Q8N5C8 712 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SLC17A8Q8NDX2 589 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 UBASH3BQ8TF42 649 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 TMBIM4Q9HC24 238 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 HMG20AQ9NP66 347 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SCN3BQ9NY72 215 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 NEXMIFQ5QGS0 1516 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 EVPLLA8MZ36 301 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 RAD51BO15315 384 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ADCY6O43306 1168 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SNX32Q86XE0 403 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 MAPKAPK5Q8IW41 473 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ANKRD13AQ8IZ07 590 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 PPM1KQ8N3J5 372 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 RTN3O95197 1032 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 CLCN2P51788 898 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 YWHAEP62258 255 aaKnown RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 EFTUD2Q15029 972 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 AKIRIN2Q53H80 203 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 IZUMO2Q6UXV1 221 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ATG14Q6ZNE5 492 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 RBM41Q96IZ5 413 aaKnown RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ROPN1BQ9BZX4 212 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ROPN1Q9HAT0 212 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 AASDHPPTQ9NRN7 309 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 DNAAF2Q9NVR5 837 aaKnown RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SUN2Q9UH99 717 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 PRG3Q9Y2Y8 225 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 NEURL4Q96JN8 1562 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 SRRM3A6NNA2 597 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 FOSP01100 380 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 PLA2G4BP0C869 781 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 CDC25CP30307 473 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 BNC1Q01954 994 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 KIF19Q2TAC6 998 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 LVRNQ6Q4G3 990 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 ARHGAP27Q6ZUM4 889 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 PCGF5Q86SE9 256 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 USP38Q8NB14 1042 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 MDM1Q8TC05 714 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 MS4A14Q96JA4 679 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 KLHL32Q96NJ5 620 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 MLXQ9UH92 298 aa10.08□□□□□ -0.8
SMAD9-203ENST00000399275 HERC5Q9UII4 1024 aaKnown RBP10.08□□□□□ -0.8
SMAD9-203ENST00000399275 MYO3AQ8NEV4 1616 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 SAC3D1A6NKF1 404 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 PIK3CAP42336 1068 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ITGA7Q13683 1181 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 MAPRE1Q15691 268 aaKnown RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ANKRD40Q6AI12 368 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 LRRC20Q8TCA0 184 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 RAD54LQ92698 747 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 SYN2Q92777 582 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 PPP2R3CQ969Q6 453 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 RMDN1Q96DB5 314 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ZSCAN32Q9NX65 697 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 GGA2Q9UJY4 613 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 K7ENM7 598 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 RAD51CO43502 376 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 TRIM13O60858 407 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 EIF6P56537 245 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms