RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CLCN4P51793 760 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GUCY2FP51841 1108 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 POSTNQ15063 836 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ZBTB6Q15916 424 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 JADE1Q6IE81 842 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 KANK3Q6NY19 840 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SYCE2Q6PIF2 218 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 EPM2AIP1Q7L775 607 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SLC22A17Q8WUG5 538 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 DDX27Q96GQ7 796 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TTPALQ9BTX7 342 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PCIF1Q9H4Z3 704 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CDH22Q9UJ99 828 aa15.33■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GOLGA8IPA6NC78 632 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GOLGA8JA6NMD2 632 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ZNF202O95125 648 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SRGAP2BP0DMP2 458 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SMAD4Q13485 552 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SMAD2Q15796 467 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PUS10Q3MIT2 529 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 STXBP4Q6ZWJ1 553 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 C12orf76Q8N812 135 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FEZF2Q8TBJ5 459 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SCFD1Q8WVM8 642 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CASP10Q92851 521 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 S1PR5Q9H228 398 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 RXFP1Q9HBX9 757 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 USP25Q9UHP3 1055 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SSX2IPQ9Y2D8 614 aa15.32■□□□□ 0.04
HLA-DQB1-202ENST00000399079 EIF3DO15371 548 aaKnown RBP eCLIP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 NFICP08651 508 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SPATA31D3P0C874 917 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GARTP22102 1010 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TKTP29401 623 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 RPL9P32969 192 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 WNT7BP56706 349 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ELAVL2Q12926 359 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 KMT5BQ4FZB7 885 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 KRBA2Q6ZNG9 492 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SPATA31D4Q6ZUB0 917 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PALB2Q86YC2 1186 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 LNX1Q8TBB1 728 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 NOC3LQ8WTT2 800 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CD320Q9NPF0 282 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 UBQLN1Q9UMX0 589 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 USP15Q9Y4E8 981 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 NUB1Q9Y5A7 615 aa15.31■□□□□ 0.04
HLA-DQB1-202ENST00000399079 NCOR1O75376 2440 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TGFB1I1O43294 461 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TRAPPC3O43617 180 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ADH1AP07327 375 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FGFR3P22607 806 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 STK4Q13043 487 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ARMCX5Q6P1M9 558 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PPFIBP1Q86W92 1011 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PIK3R5Q8WYR1 880 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CLSTN3Q9BQT9 956 aa15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQB1-202ENST00000399079 BDP1A6H8Y1 2624 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PDCD11Q14690 1871 aaKnown RBP15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PPEF2O14830 753 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ADAM12O43184 909 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 WEE2P0C1S8 567 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 HOXB8P17481 243 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CYP3A5P20815 502 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 LRPAP1P30533 357 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TMEM132DQ14C87 1099 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PSMD5Q16401 504 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SPATA1Q5VX52 437 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CD302Q8IX05 232 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 EFCAB13Q8IY85 973 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GPR65Q8IYL9 337 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 KIAA0895Q8NCT3 520 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 ASB7Q9H672 318 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FNIP2Q9P278 1114 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 VWA8A3KMH1 1905 aa15.29■□□□□ 0.04
HLA-DQB1-202ENST00000399079 CLIC2O15247 247 aa15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 TGM5O43548 720 aa15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 LDHAP00338 332 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 GLUD1P00367 558 aa15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 RPN1P04843 607 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 MCM4P33991 863 aa15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 DPYDQ12882 1025 aa15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-202ENST00000399079 RARS2Q5T160 578 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms