RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 SURF1Q15526 300 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PTPROQ16827 1216 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PDE12Q6L8Q7 609 aaKnown RBP11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 CD300LGQ6UXG3 332 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 VN1R3Q9BXE9 311 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 TLR9Q9NR96 1032 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 CACNG4Q9UBN1 327 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 TUBGCP4Q9UGJ1 667 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 ADAM28Q9UKQ2 775 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PRG3Q9Y2Y8 225 aaPredicted RBP11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 MTCH2Q9Y6C9 303 aa11.33□□□□□ -0.6
CYCSP55-201ENST00000399027 PODXLO00592 558 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 CLDN10P78369 228 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 ENPEPQ07075 957 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 CYP24A1Q07973 514 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 WDR49Q8IV35 697 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 BEST2Q8NFU1 509 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 MKNK1Q9BUB5 465 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 HERC2P3Q9BVR0 1158 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 PDE11AQ9HCR9 933 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 IRAK3Q9Y616 596 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 MYO9BQ13459 2157 aa11.32□□□□□ -0.6
CYCSP55-201ENST00000399027 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 PIRO00625 290 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 AKAP3O75969 853 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 SOD2P04179 222 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CTSAP10619 480 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 FOSL2P15408 326 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 PAX3P23760 479 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 IRS1P35568 1242 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CASP4P49662 377 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 NLRP12P59046 1061 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 ERVFC1P60507 584 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 FKBP3Q00688 224 aaKnown RBP11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 ADAM9Q13443 819 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 TIGD5Q53EQ6 642 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 FUT10Q6P4F1 479 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 MLKLQ8NB16 471 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 RDH13Q8NBN7 331 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CXorf38Q8TB03 319 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 PARD3BQ8TEW8 1205 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 NOC3LQ8WTT2 800 aaKnown RBP11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CACTINQ8WUQ7 758 aaKnown RBP11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 RABGGTAQ92696 567 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CGRRF1Q99675 332 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 TSG101Q99816 390 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 GPR62Q9BZJ7 368 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 CHST7Q9NS84 486 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 FRMD4BQ9Y2L6 1034 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 SF3B1O75533 1304 aaKnown RBP eCLIP11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 PTPRJQ12913 1337 aa11.31□□□□□ -0.6
CYCSP55-201ENST00000399027 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 CETN3O15182 167 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 SLC16A3O15427 465 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 TADA2AO75478 443 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 B3GAT3O94766 335 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 IGFBP4P22692 258 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 IGFBP6P24592 240 aaPredicted RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 ELAVL2Q12926 359 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 PAK1Q13153 545 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 C9orf57Q5W0N0 161 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 CEP135Q66GS9 1140 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 INTS8Q75QN2 995 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 C1orf127Q8N9H9 656 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 HASPINQ8TF76 798 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 BORCS6Q96GS4 357 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 TCF25Q9BQ70 676 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 NSUN3Q9H649 340 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 NGRNQ9NPE2 291 aaKnown RBP11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 RWDD2AQ9UIY3 292 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms