RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 KCNE1P15382 129 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 HNRNPH3P31942 346 aaKnown RBP17.96■□□□□ 0.47
CDH23-204ENST00000398792 CCL23P55773 120 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 ZBTB6Q15916 424 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 GLRA4Q5JXX5 417 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 SCARA3Q6AZY7 606 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 CXorf38Q8TB03 319 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 HELQQ8TDG4 1101 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 SCLYQ96I15 445 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 TSPAN18Q96SJ8 248 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 IMPG2Q9BZV3 1241 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 SIX4Q9UIU6 781 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 ITGA11Q9UKX5 1188 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 PLAGL2Q9UPG8 496 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 SCN5AQ14524 2016 aa17.96■□□□□ 0.47
CDH23-204ENST00000398792 F8VZ95 297 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 ASS1P00966 412 aaKnown RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 CST3P01034 146 aaPredicted RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 CXCL10P02778 98 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 ITGB3P05106 788 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 SKILP12757 684 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 CYP2C18P33260 490 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 NOP14P78316 857 aaKnown RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 TRPC3Q13507 836 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 TSR1Q2NL82 804 aaKnown RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 WDR44Q5JSH3 913 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 WDR59Q6PJI9 974 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 AGMOQ6ZNB7 445 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 FAM43BQ6ZT52 329 aaPredicted RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 ECHDC2Q86YB7 292 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 TMEM130Q8N3G9 435 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 PPM1KQ8N3J5 372 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 SEPT8Q92599 483 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 APBB2Q92870 758 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 LPPQ93052 612 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 ELMO3Q96BJ8 720 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 STK33Q9BYT3 514 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 GPR88Q9GZN0 384 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 TSPYL2Q9H2G4 693 aaPredicted RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 APOBEC3GQ9HC16 384 aaKnown RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 UBE2TQ9NPD8 197 aaPredicted RBP17.95■□□□□ 0.46
CDH23-204ENST00000398792 DPP3Q9NY33 737 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 TUBGCP4Q9UGJ1 667 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 ZKSCAN5Q9Y2L8 839 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 GIT1Q9Y2X7 761 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 TRIP11Q15643 1979 aa17.95■□□□□ 0.46
CDH23-204ENST00000398792 SMIM28A0A1B0GU29 152 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 C9IYK1 514 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 EN2P19622 333 aaPredicted RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 MLH1P40692 756 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 GUCY2FP51841 1108 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 MYL6P60660 151 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 GCNT1Q02742 428 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 SPOPLQ6IQ16 392 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 RTN4RL1Q86UN2 441 aaPredicted RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 DBF4BQ8NFT6 615 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 BEST2Q8NFU1 509 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 KAT5Q92993 513 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 TATDN2Q93075 761 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 KREMEN1Q96MU8 473 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 XYLT2Q9H1B5 865 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 UBQLN1Q9UMX0 589 aaKnown RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 PTGESO14684 152 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 KRT19P08727 400 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 POLR2BP30876 1174 aaKnown RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 DRAP1Q14919 205 aaPredicted RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 ARHGAP44Q17R89 818 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 ZNF699Q32M78 642 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 SLC24A5Q71RS6 500 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 C18orf25Q96B23 403 aaPredicted RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 FAM81BQ96LP2 452 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 RSAD1Q9HA92 442 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 ZNHIT6Q9NWK9 470 aaKnown RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.94■□□□□ 0.46
CDH23-204ENST00000398792 PYCARDQ9ULZ3 195 aa17.94■□□□□ 0.46
CDH23-204ENST00000398792 ARHGAP6O43182 974 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 XPOTO43592 962 aaKnown RBP17.93■□□□□ 0.46
CDH23-204ENST00000398792 CLSTN1O94985 981 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 PNMA6AP0CW24 399 aaPredicted RBP17.93■□□□□ 0.46
CDH23-204ENST00000398792 MFAP3P55082 362 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 CDK17Q00537 523 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 ASIC2Q16515 512 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 SGSM1Q2NKQ1 1148 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 CYP26C1Q6V0L0 522 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 ENOSF1Q7L5Y1 443 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 TMTC1Q8IUR5 882 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 GPIHBP1Q8IV16 184 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 RNF169Q8NCN4 708 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 TAF4BQ92750 862 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 PPP1R10Q96QC0 940 aaKnown RBP17.93■□□□□ 0.46
CDH23-204ENST00000398792 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 GAD1Q99259 594 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 RNF19AQ9NV58 838 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 AIPL1Q9NZN9 384 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms