RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SHCBP1Q8NEM2 672 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 DCUN1D1Q96GG9 259 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 SNX9Q9Y5X1 595 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 FOXN1O15353 648 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 PQBP1O60828 265 aaKnown RBP15.04■□□□□ -0
PCDHA11-201ENST00000398640 PRAMEP78395 509 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 OR6P1Q8NGX9 317 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 BHMTQ93088 406 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 CEP19Q96LK0 163 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 TRIM15Q9C019 465 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 RSPH10B2B2RC85 870 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 RPLP2P05387 115 aaKnown RBP15.04■□□□□ -0
PCDHA11-201ENST00000398640 RSPH10BP0C881 870 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 AKR1A1P14550 325 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 SAMD3Q8N6K7 520 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 MAP3K14Q99558 947 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 PITPNM3Q9BZ71 974 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 RGL1Q9NZL6 768 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 SYNGAP1Q96PV0 1343 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 GPS1Q13098 491 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 EMC2Q15006 297 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 NR1H4Q96RI1 486 aaPredicted RBP15.04■□□□□ -0
PCDHA11-201ENST00000398640 SLC13A1Q9BZW2 595 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 PLEKHA5Q9HAU0 1116 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 CASS4Q9NQ75 786 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 CAPN11Q9UMQ6 739 aa15.04■□□□□ -0
PCDHA11-201ENST00000398640 PODXLO00592 558 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ERVK-9P63128 1117 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ERVK-24P63145 666 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 CUL1Q13616 776 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 SYTL3Q4VX76 610 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 TADA2BQ86TJ2 420 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 SH3TC2Q8TF17 1288 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 YME1L1Q96TA2 773 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 XPNPEP3Q9NQH7 507 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 KLHL11Q9NVR0 708 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 SLIT3O75094 1523 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 GPR182O15218 404 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 MAPK13O15264 365 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 TMCC1O94876 653 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 RGS7P49802 495 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 CDK17Q00537 523 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ROR1Q01973 937 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 DUOXA2Q1HG44 320 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 AGR3Q8TD06 166 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 MTG1Q9BT17 334 aaPredicted RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 HTATIP2Q9BUP3 242 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 TAF1DQ9H5J8 278 aaPredicted RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 IFNA8P32881 189 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 NAALADL2Q58DX5 795 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 LRRC71Q8N4P6 559 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 TTC13Q8NBP0 860 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 TNIP3Q96KP6 325 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 MAGEB5Q9BZ81 275 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 CYP26B1Q9NR63 512 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 IP6K2Q9UHH9 426 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 LGALS16A8MUM7 142 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ATP9BO43861 1147 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 EYA4O95677 639 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ADORA2AP29274 412 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ATP6V1E1P36543 226 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 SPARCL1Q14515 664 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 CASP8Q14790 479 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ZC3H18Q86VM9 953 aaKnown RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 GMCL1Q96IK5 515 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 IDI2Q9BXS1 227 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 ACOT2P49753 483 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 EPM2AIP1Q7L775 607 aaPredicted RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 SYT2Q8N9I0 419 aaPredicted RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 HDAC6Q9UBN7 1215 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 RRP15Q9Y3B9 282 aaKnown RBP15.03■□□□□ -0
PCDHA11-201ENST00000398640 EMSYQ7Z589 1322 aa15.03■□□□□ -0
PCDHA11-201ENST00000398640 COL3A1P02461 1466 aaPredicted RBP15.02■□□□□ -0
PCDHA11-201ENST00000398640 DNAJC8O75937 253 aaPredicted RBP15.02■□□□□ -0
PCDHA11-201ENST00000398640 LRG1P02750 347 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 GUCY1A2P33402 732 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 HSP90AA5PQ58FG0 334 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 ACAD11Q709F0 780 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 RAB42Q8N4Z0 105 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 SLC38A7Q9NVC3 462 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 APOBEC2Q9Y235 224 aaKnown RBP15.02■□□□□ -0
PCDHA11-201ENST00000398640 ZNF541Q9H0D2 1346 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 TBX3O15119 743 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 EIF3BP55884 814 aaKnown RBP15.02■□□□□ -0
PCDHA11-201ENST00000398640 IL31Q6EBC2 164 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 IGDCC4Q8TDY8 1250 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 HPS3Q969F9 1004 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 TRIM55Q9BYV6 548 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 THEGQ9P2T0 379 aa15.02■□□□□ -0
PCDHA11-201ENST00000398640 HOXA2O43364 376 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 KRT38O76015 456 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 EEF1DP29692 281 aaKnown RBP15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 ALS2CLQ60I27 953 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 KRT39Q6A163 491 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 NFRKBQ6P4R8 1299 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 WDR75Q8IWA0 830 aaKnown RBP15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 WNK4Q96J92 1243 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms