RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 UROC1Q96N76 676 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 POP1Q99575 1024 aaKnown RBP27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 PUF60Q9UHX1 559 aaKnown RBP27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 ADAM28Q9UKQ2 775 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 FRMD4BQ9Y2L6 1034 aa27.49■■□□□ 1.99
TMEM55B-202ENST00000398020 MYO7AQ13402 2215 aa27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 XPOTO43592 962 aaKnown RBP27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 AKAP3O75969 853 aa27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 RPL13P26373 211 aaKnown RBP27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 IRS1P35568 1242 aa27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 PPP1R2P41236 205 aa27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 DPCR1Q3MIW9 517 aa27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 RBM43Q6ZSC3 357 aaKnown RBP27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 MTCH2Q9Y6C9 303 aa27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 PRRC2BQ5JSZ5 2229 aaKnown RBP27.48■■□□□ 1.99
TMEM55B-202ENST00000398020 ATG2AQ2TAZ0 1938 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 LRRC63Q05C16 580 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 PSMD6Q15008 389 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 TAS1R1Q7RTX1 841 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 DDX53Q86TM3 631 aaKnown RBP27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 VPS52Q8N1B4 723 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 MICALL1Q8N3F8 863 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 PLEKHO2Q8TD55 490 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 MRPL38Q96DV4 380 aaKnown RBP27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 MFSD14AQ96MC6 490 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 TSPAN18Q96SJ8 248 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 TLR9Q9NR96 1032 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 LZTS1Q9Y250 596 aa27.47■■□□□ 1.99
TMEM55B-202ENST00000398020 PPEF2O14830 753 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 CYP3A5P20815 502 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 UBE3AQ05086 875 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 PAK1Q13153 545 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 PTPROQ16827 1216 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 FUT10Q6P4F1 479 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 DCLRE1AQ6PJP8 1040 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 OR5B17Q8NGF7 314 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 MICAL1Q8TDZ2 1067 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 DDX27Q96GQ7 796 aaKnown RBP27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 GPR62Q9BZJ7 368 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 MTMR12Q9C0I1 747 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 GZF1Q9H116 711 aaPredicted RBP27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 DPP3Q9NY33 737 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 RPL9P32969 192 aaKnown RBP27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 NLRP12P59046 1061 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 CD300LGQ6UXG3 332 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 B3GALT6Q96L58 329 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 FNBP1Q96RU3 617 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 TCF25Q9BQ70 676 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 ENTPD7Q9NQZ7 604 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 COL6A3P12111 3177 aa27.46■■□□□ 1.99
TMEM55B-202ENST00000398020 I3L4J1 428 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 CETN3O15182 167 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 TNNI1P19237 187 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 LRPAP1P30533 357 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 FKBP3Q00688 224 aaKnown RBP27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 KLHL40Q2TBA0 621 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 PLPP4Q5VZY2 271 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 SCARA3Q6AZY7 606 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 TTI2Q6NXR4 508 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 TMC7Q7Z402 723 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 MLKLQ8NB16 471 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 AUTS2Q8WXX7 1259 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 DUSP9Q99956 384 aaKnown RBP27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 LMAN2LQ9H0V9 348 aa27.45■■□□□ 1.98
TMEM55B-202ENST00000398020 TMEM191BP0C7N4 346 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 PTMSP20962 102 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 CA8P35219 290 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 BRCC3P46736 316 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 DLG4P78352 724 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 SURF1Q15526 300 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 NT5DC4Q86YG4 428 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 FAM186BQ8IYM0 893 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 INTS13Q9NVM9 706 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 PRUNE2Q8WUY3 3088 aa27.44■■□□□ 1.98
TMEM55B-202ENST00000398020 EFEMP2O95967 443 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 PSMC2P35998 433 aaKnown RBP27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 C9orf57Q5W0N0 161 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 WDR49Q8IV35 697 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 C1orf127Q8N9H9 656 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 CACTINQ8WUQ7 758 aaKnown RBP27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 CGRRF1Q99675 332 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 NUB1Q9Y5A7 615 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 SF3B1O75533 1304 aaKnown RBP eCLIP27.43■■□□□ 1.984e-7■■■■■ 133.7
TMEM55B-202ENST00000398020 BICDL2A1A5D9 508 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 LRRIQ3A6PVS8 624 aaPredicted RBP27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 TMEM189-UBE2V1I3L0A0 370 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 PARD3BQ8TEW8 1205 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 ANKRD36BP1Q96IX9 119 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 ZBP1Q9H171 429 aa27.43■■□□□ 1.98
TMEM55B-202ENST00000398020 C2CD2LO14523 706 aa27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 SOD2P04179 222 aa27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 ITGB3P05106 788 aa27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 POU3F3P20264 500 aaPredicted RBP27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 CCDC85BQ15834 202 aaPredicted RBP27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 DUOXA2Q1HG44 320 aa27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 ZC3H3Q8IXZ2 948 aaKnown RBP27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 RNF168Q8IYW5 571 aaPredicted RBP27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 ZNF516Q92618 1163 aa27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 SYAP1Q96A49 352 aaPredicted RBP27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 MED15Q96RN5 788 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms