RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 TRIM59Q8IWR1 403 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 SLC15A3Q8IY34 581 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 FNDC8Q8TC99 324 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 GAB3Q8WWW8 586 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 WHRNQ9P202 907 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 STK17AQ9UEE5 414 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 HACL1Q9UJ83 578 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 NUB1Q9Y5A7 615 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 FRMPD4Q14CM0 1322 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 TAF1P21675 1872 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 hCG_2014768A0A024R1R8 64 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 PRPF4O43172 522 aaKnown RBP eCLIP12.2□□□□□ -0.46
PUM3-202ENST00000397885 RNASEH1O60930 286 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 TTC4O95801 387 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 GAS8O95995 478 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 HARSP12081 509 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 MTTPP55157 894 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 AP2B1P63010 937 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 ASPHQ12797 758 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 MED21Q13503 144 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 KRT72Q14CN4 511 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 KYNUQ16719 465 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 PDCD4Q53EL6 469 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 UBAP2Q5T6F2 1119 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 SV2BQ7L1I2 683 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 NLRP9Q7RTR0 991 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 ADGRA1Q86SQ6 560 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 VPS52Q8N1B4 723 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 DQX1Q8TE96 717 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 KCNN1Q92952 543 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 ABHD8Q96I13 439 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 NSL1Q96IY1 281 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 RIOK1Q9BRS2 568 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 SIKE1Q9BRV8 207 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 ANKRD2Q9GZV1 360 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 GPAMQ9HCL2 828 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 R3HDM2Q9Y2K5 976 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 TRIM43BA6NCK2 446 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 OPHN1O60890 802 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 DNAJC6O75061 913 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 ALDH2P05091 517 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 FGRP09769 529 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 KRT13P13646 458 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 ANPEPP15144 967 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 GTF2H1P32780 548 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 WDR4P57081 412 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 MAP3K21Q5TCX8 1036 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 FYB2Q5VWT5 728 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 NMD3Q96D46 503 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 PLIN2Q99541 437 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 CCDC77Q9BR77 488 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 NDE1Q9NXR1 346 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 UTP6Q9NYH9 597 aaKnown RBP12.2□□□□□ -0.46
PUM3-202ENST00000397885 ZNF804BA4D1E1 1349 aa12.2□□□□□ -0.46
PUM3-202ENST00000397885 CCDC162PA2VCL2 907 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 HTR3EA5X5Y0 456 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 MIF4GDA9UHW6 222 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 CBFA2T3O75081 653 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 TMEM253P0C7T8 217 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 RPL5P46777 297 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 CDC16Q13042 620 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 CLPPQ16740 277 aaPredicted RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 TRMT5Q32P41 509 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 TCERG1LQ5VWI1 586 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 GRAMD4Q6IC98 578 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 C1orf228Q6PIY5 440 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 NET1Q7Z628 596 aaPredicted RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 DENND1AQ8TEH3 1009 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 C18orf8Q96DM3 657 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 PRICKLE1Q96MT3 831 aaPredicted RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 INIPQ9NRY2 104 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 E9PBE3 544 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 M0R2N6 131 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 CAV1Q03135 178 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 STAT4Q14765 748 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 AOC3Q16853 763 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 C6orf163Q5TEZ5 329 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 FAM91A1Q658Y4 838 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 CCDC137Q6PK04 289 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 BBS5Q8N3I7 341 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 DAGLBQ8NCG7 672 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 SLCO2A1Q92959 643 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 TTC25Q96NG3 672 aa12.19□□□□□ -0.46
PUM3-202ENST00000397885 HNRNPABQ99729 332 aaKnown RBP12.19□□□□□ -0.46
PUM3-202ENST00000397885 PLK2Q9NYY3 685 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms