RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PARVAQ9NVD7 372 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 SNTG2Q9NY99 539 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 DDX20Q9UHI6 824 aaKnown RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 ITGA11Q9UKX5 1188 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 CDY2AQ9Y6F7 541 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 N4BP2Q86UW6 1770 aaPredicted RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 GYPCP04921 128 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 PDGFRBP09619 1106 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 CRYBB1P53674 252 aaPredicted RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 ITGA7Q13683 1181 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 PSMD6Q15008 389 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 C4orf50Q6ZRC1 276 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 BBS5Q8N3I7 341 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 ZNF564Q8TBZ8 553 aaPredicted RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 SH3TC2Q8TF17 1288 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 RFFLQ8WZ73 363 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 C18orf8Q96DM3 657 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 SLITRK6Q9H5Y7 841 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 EHD2Q9NZN4 543 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 KIAA1257Q9ULG3 409 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 H7C0C1 242 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 FGFR4P22455 802 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 ATP5OP48047 213 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 NCAPHQ15003 741 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 FAM102AQ5T9C2 384 aaPredicted RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 DEFB128Q7Z7B8 93 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 MORC4Q8TE76 937 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 DPF3Q92784 378 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 DUSP9Q99956 384 aaKnown RBP8.81□□□□□ -1
PTPRD-204ENST00000397606 NUP85Q9BW27 656 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 IP6K2Q9UHH9 426 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 SSX2IPQ9Y2D8 614 aa8.81□□□□□ -1
PTPRD-204ENST00000397606 INHAP05111 366 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 NCKAP1LP55160 1127 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 CDO1Q16878 200 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 COBLL1Q53SF7 1204 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 CCDC91Q7Z6B0 441 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 USP38Q8NB14 1042 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 DHX38Q92620 1227 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 IQCGQ9H095 443 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 CYP3A43Q9HB55 503 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 INTS13Q9NVM9 706 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 Q9Y3F1 56 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 MAPK13O15264 365 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ZBTB24O43167 697 aaPredicted RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 ASGR1P07306 291 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ELAVL2Q12926 359 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 CFAP58Q5T655 872 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 FOXR2Q6PJQ5 311 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 TAS1R2Q8TE23 839 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 AFAP1L1Q8TED9 768 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 LENG9Q96B70 501 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 SEZ6LQ9BYH1 1024 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 DSEQ9UL01 958 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 MOXD2PA6NHM9 499 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 GRIK1P39086 918 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 CASP5P51878 434 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ZRSR2Q15696 482 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 BMT2Q1RMZ1 405 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ZNF792Q3KQV3 632 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ARSHQ5FYA8 562 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 BZW1Q7L1Q6 419 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 ADAT2Q7Z6V5 191 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 BBOF1Q8ND07 529 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 PARD3BQ8TEW8 1205 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 MAGOHBQ96A72 148 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 RBM41Q96IZ5 413 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 CPSF3Q9UKF6 684 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 PLAGL2Q9UPG8 496 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 NAV1Q8NEY1 1877 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ANO9A1A5B4 782 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 ACADSBP45954 432 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 KCNA10Q16322 511 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 TC2NQ8N9U0 490 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 SLC35C1Q96A29 364 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 YME1L1Q96TA2 773 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 POP1Q99575 1024 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 FTHL17Q9BXU8 183 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 MRPL9Q9BYD2 267 aaKnown RBP8.8□□□□□ -1
PTPRD-204ENST00000397606 RSAD1Q9HA92 442 aa8.8□□□□□ -1
PTPRD-204ENST00000397606 PASKQ96RG2 1323 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 MYH1P12882 1939 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 PALMO75781 387 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ZRANB2O95218 330 aaKnown RBP eCLIP8.79□□□□□ -1
PTPRD-204ENST00000397606 ADCY8P40145 1251 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 FBXO47Q5MNV8 452 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 SPATA20Q8TB22 786 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 TSC1Q92574 1164 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 MED15Q96RN5 788 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 CHP1Q99653 195 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ADAM2Q99965 735 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 DHX33Q9H6R0 707 aaKnown RBP8.79□□□□□ -1
PTPRD-204ENST00000397606 UVRAGQ9P2Y5 699 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ANKRD63C9JTQ0 380 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
PTPRD-204ENST00000397606 MCF2LO15068 1137 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 KRT7P08729 469 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms