RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 DSTYKQ6XUX3 929 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 FAM76AQ8TAV0 307 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 RAET1EQ8TD07 263 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 MRPL47Q9HD33 250 aaKnown RBP16.21■□□□□ 0.19
MCF2L-205ENST00000397017 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 TIAM2Q8IVF5 1701 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 A0A1B0GUL6 1792 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 CUL2Q13617 745 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 SURF1Q15526 300 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 NOP9Q86U38 636 aaKnown RBP16.21■□□□□ 0.19
MCF2L-205ENST00000397017 TLK2Q86UE8 772 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 TPCN2Q8NHX9 752 aa16.21■□□□□ 0.19
MCF2L-205ENST00000397017 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-205ENST00000397017 GRID2IPA4D2P6 1211 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 PDE2AO00408 941 aaPredicted RBP16.21■□□□□ 0.18
MCF2L-205ENST00000397017 SART1O43290 800 aaKnown RBP16.21■□□□□ 0.18
MCF2L-205ENST00000397017 GARTP22102 1010 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 DHX9Q08211 1270 aaKnown RBP16.21■□□□□ 0.18
MCF2L-205ENST00000397017 CYP4F22Q6NT55 531 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 HACE1Q8IYU2 909 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 SPIRE2Q8WWL2 714 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 CRYGNQ8WXF5 182 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 PBKQ96KB5 322 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 GPR20Q99678 358 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 POLIQ9UNA4 740 aa16.21■□□□□ 0.18
MCF2L-205ENST00000397017 RASSF10A6NK89 507 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 TTI1O43156 1089 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 ZRANB2O95218 330 aaKnown RBP eCLIP16.2■□□□□ 0.18
MCF2L-205ENST00000397017 MAP3K6O95382 1288 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 ABCD1P33897 745 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 DR1Q01658 176 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 PCDHB2Q9Y5E7 798 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 BCORQ6W2J9 1755 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 ADSSP30520 456 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 SMAD1Q15797 465 aaKnown RBP16.2■□□□□ 0.18
MCF2L-205ENST00000397017 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-205ENST00000397017 AADACL2Q6P093 401 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 CCDC89Q8N998 374 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 SNTG2Q9NY99 539 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 SGK1O00141 431 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 STRNO43815 780 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 TBXAS1P24557 533 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-205ENST00000397017 MPZL3Q6UWV2 235 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 RFX6Q8HWS3 928 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 MGARPQ8TDB4 240 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 HPDLQ96IR7 371 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 ADAM33Q9BZ11 813 aa16.2■□□□□ 0.18
MCF2L-205ENST00000397017 HADHQ16836 314 aaKnown RBP16.19■□□□□ 0.18
MCF2L-205ENST00000397017 EPM2AIP1Q7L775 607 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-205ENST00000397017 SYN2Q92777 582 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-205ENST00000397017 TLR10Q9BXR5 811 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 CARSP49589 748 aaKnown RBP16.19■□□□□ 0.18
MCF2L-205ENST00000397017 SGSM1Q2NKQ1 1148 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 PPP1R21Q6ZMI0 780 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 IRF2BP2Q7Z5L9 587 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 HASPINQ8TF76 798 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 FRMD3A2A2Y4 597 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 ITGA4P13612 1032 aa16.19■□□□□ 0.18
MCF2L-205ENST00000397017 SMCHD1A6NHR9 2005 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 H7C0C1 242 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 ATP5OP48047 213 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 ZNF131P52739 623 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 RNF187Q5TA31 235 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-205ENST00000397017 ABI1Q8IZP0 508 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 AFAP1L1Q8TED9 768 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 RSAD2Q8WXG1 361 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 LRRC45Q96CN5 670 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 FAM193BQ96PV7 902 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-205ENST00000397017 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■□□ 15.2
MCF2L-205ENST00000397017 TTYH3Q9C0H2 523 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 SEPT10Q9P0V9 454 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 GOLGA8MH3BSY2 632 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 GBP2P32456 591 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-205ENST00000397017 NUMBP49757 651 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 CCL14Q16627 93 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 BMT2Q1RMZ1 405 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 HGSNATQ68CP4 663 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 EMC1Q8N766 993 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 BEST2Q8NFU1 509 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-205ENST00000397017 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 CISHQ9NSE2 258 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 SYNGAP1Q96PV0 1343 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 LCP1P13796 627 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 TAF12Q16514 161 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 TDRD10Q5VZ19 366 aaKnown RBP16.18■□□□□ 0.18
MCF2L-205ENST00000397017 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 HVCN1Q96D96 273 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 LRRC4Q9HBW1 653 aa16.18■□□□□ 0.18
MCF2L-205ENST00000397017 TIMM13Q9Y5L4 95 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-205ENST00000397017 E7EVH7 732 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 MYZAPP0CAP1 466 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 GNAT1P11488 350 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms