RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ITIH2P19823 946 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 RPS6P62753 249 aaKnown RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 SYTL3Q4VX76 610 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 TTC33Q6PID6 262 aaPredicted RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 P3H2Q8IVL5 708 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 VPS50Q96JG6 964 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 RBM15Q96T37 977 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 TASP1Q9H6P5 420 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ZHX2Q9Y6X8 837 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 POTEFA5A3E0 1075 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 LCP1P13796 627 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 SSTR3P32745 418 aaPredicted RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ERFEQ4G0M1 354 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 POTEGQ6S5H5 508 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 POTEEQ6S8J3 1075 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 MIGA2Q7L4E1 593 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 GPD1LQ8N335 351 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 FAM129AQ9BZQ8 928 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ARHGEF38Q9NXL2 777 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 KRT76Q01546 638 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 CCDC144BQ3MJ40 725 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 ZNF467Q7Z7K2 595 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 RHBDL2Q9NX52 303 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 TTC37Q6PGP7 1564 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 C3orf70A6NLC5 250 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 PHF20L1A8MW92 1017 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 HIST1H2AGP0C0S8 130 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 HIST1H2ADP20671 130 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 SCP2P22307 547 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 ADORA2BP29275 332 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 STAT3P40763 770 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 PPP3CCP48454 512 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 CDK17Q00537 523 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 PROSER3Q2NL68 480 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 MEI1Q5TIA1 1274 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 C19orf60Q96EN9 201 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 HIST1H2AHQ96KK5 128 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 HIST1H2AJQ99878 128 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 H2AFJQ9BTM1 129 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 NEU2Q9Y3R4 380 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 NBPF26B4DH59 902 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 TNPO2O14787 897 aaKnown RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 TCN1P20061 433 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 SESN2P58004 480 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 SF3B3Q15393 1217 aaKnown RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 MICU2Q8IYU8 434 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 NBPF15Q8N660 670 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 PDP2Q9P2J9 529 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 FEM1BQ9UK73 627 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 SOX13Q9UN79 622 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 ASNSP08243 561 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 RALAP11233 206 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 NCALDP61601 193 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 TXNRD1Q16881 649 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 SH2D3CQ8N5H7 860 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 SPON2Q9BUD6 331 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 FAM217BQ9NTX9 383 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 PCMTD2Q9NV79 361 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 GUF1Q8N442 669 aaKnown RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 WDR24Q96S15 920 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 RGS5O15539 181 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 QARSP47897 775 aaKnown RBP14.66□□□□□ -0.06
COL4A3-202ENST00000396578 KIZQ2M2Z5 673 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 IMPAD1Q9NX62 359 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 IL1RAPL1Q9NZN1 696 aa14.66□□□□□ -0.06
COL4A3-202ENST00000396578 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 ATXN3P54252 364 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 SENP7Q9BQF6 1050 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 POLR3FQ9H1D9 316 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 CCT8L1PA6NM43 557 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 UBXN8O00124 270 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 HMGB3O15347 200 aaKnown RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 PSMA4P25789 261 aaKnown RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 PTK7Q13308 1070 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 TLK2Q86UE8 772 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 SLC35G2Q8TBE7 412 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 SEC31BQ9NQW1 1179 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 MYO3BQ8WXR4 1341 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 USP17L5A8MUK1 530 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 CLASP2O75122 1294 aaKnown RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 CCDC81Q6ZN84 652 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 GPR141Q7Z602 305 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 NSL1Q96IY1 281 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 OSBPL8Q9BZF1 889 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 DPYSL4O14531 572 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 STRNO43815 780 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 SERPIND1P05546 499 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 CYP2C19P33261 490 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 GTF2H3Q13889 308 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 GLYCTKQ8IVS8 523 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 NDUFS3O75489 264 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 USP1O94782 785 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 HPCAP84074 193 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 PIGHQ14442 188 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms