RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 PFASO15067 1338 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 ADGRA3Q8IWK6 1321 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 LOXHD1Q8IVV2 1947 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 H0Y3Z8 333 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 PTPRAP18433 802 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 DRD4P21917 467 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 RRM1P23921 792 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 ADSSP30520 456 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 PDE6CP51160 858 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 BYSLQ13895 437 aaKnown RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 TMEM132BQ14DG7 1078 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 SNRNP35Q16560 246 aaKnown RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 DUPD1Q68J44 220 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 SCARA3Q6AZY7 606 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 EPS8L1Q8TE68 723 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 STAMBPL1Q96FJ0 436 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 CALR3Q96L12 384 aaKnown RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 KCNG1Q9UIX4 513 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 ZNF214Q9UL59 606 aaPredicted RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 PHF2O75151 1096 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 STBD1O95210 358 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 BRAFP15056 766 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 HOXA7P31268 230 aaPredicted RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 YWHABP31946 246 aaKnown RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 STX2P32856 288 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 OSTNP61366 133 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 ORC1Q13415 861 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 TRIM68Q6AZZ1 485 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 LPAR1Q92633 364 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 NAP1L3Q99457 506 aaPredicted RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 CRISPLD2Q9H0B8 497 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 CARD9Q9H257 536 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 EPB41L4BQ9H329 900 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 DICER1Q9UPY3 1922 aaKnown RBP9.91□□□□□ -0.82
NDE1-201ENST00000396354 PAPPA2Q9BXP8 1791 aa9.91□□□□□ -0.82
NDE1-201ENST00000396354 PIK3R2O00459 728 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 MAP3K13O43283 966 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 DDNO94850 711 aaPredicted RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 PRKAR2AP13861 404 aaKnown RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 ITGA8P53708 1063 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 CLNS1AP54105 237 aaKnown RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 BACE1P56817 501 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 EEPD1Q7L9B9 569 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 CYP4X1Q8N118 509 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 TMEM130Q8N3G9 435 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 LRRN4Q8WUT4 740 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 PPP1R16BQ96T49 567 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 MYCBPQ99417 103 aaPredicted RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 FAM167BQ9BTA0 163 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 ZDHHC18Q9NUE0 388 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 GRHL1Q9NZI5 618 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
NDE1-201ENST00000396354 AGAP1Q9UPQ3 857 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 FSBPO95073 299 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 MAP3K6O95382 1288 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 P4HBP07237 508 aaKnown RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 RALAP11233 206 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 COILP38432 576 aaPredicted RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 SESN3P58005 492 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 SP2Q02086 613 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 SLC39A4Q6P5W5 647 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 LRIG3Q6UXM1 1119 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 SLC13A5Q86YT5 568 aaPredicted RBP9.9□□□□□ -0.82
NDE1-201ENST00000396354 ANKMY2Q8IV38 441 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 FAM129AQ9BZQ8 928 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 CXorf56Q9H5V9 222 aa9.9□□□□□ -0.82
NDE1-201ENST00000396354 RIPK2O43353 540 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 CYP11B1P15538 503 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 KRT15P19012 456 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 PEX19P40855 299 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 QARSP47897 775 aaKnown RBP9.9□□□□□ -0.83
NDE1-201ENST00000396354 SNRNP48Q6IEG0 339 aaKnown RBP9.9□□□□□ -0.83
NDE1-201ENST00000396354 RFX8Q6ZV50 586 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 ZNF365Q70YC5 407 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 SLFN11Q7Z7L1 901 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 CD302Q8IX05 232 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 CEP170P1Q96L14 293 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 TMEM237Q96Q45 408 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 TCHPQ9BT92 498 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 VPS37BQ9H9H4 285 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 ZNF112Q9UJU3 913 aa9.9□□□□□ -0.83
NDE1-201ENST00000396354 PASKQ96RG2 1323 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 PTPRFP10586 1907 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 CPP00450 1065 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 NEFHP12036 1026 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 TCF4P15884 667 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 CNGA1P29973 690 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 WNT7BP56706 349 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 RWDD2BP57060 319 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 DNAJC3Q13217 504 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 NFIL3Q16649 462 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 SMTNL2Q2TAL5 461 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 MTERF2Q49AM1 385 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 TMEM270Q6UE05 265 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 EXOC3L1Q86VI1 746 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 SCYL3Q8IZE3 742 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms