RNA–Protein interactions for RNA: ENST00000395959.3

AC004987.2-201, humanhuman

BASIC

Gene AC004987.2, Length 1,148 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.2-201ENST00000395959 MEIS3P2A8K0S8 358 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 GOLGA6L6A8MZA4 724 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 PTGESO14684 152 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 HLA-DRAP01903 254 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 TPM1P09493 284 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 ACRP10323 421 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 ATICP31939 592 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 PIK3CAP42336 1068 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 GRIK3Q13003 919 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 C1orf127Q8N9H9 656 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 NEK11Q8NG66 645 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 TOP1MTQ969P6 601 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 FAXDC2Q96IV6 333 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 INTS2Q9H0H0 1204 aaKnown RBP17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 FBXL5Q9UKA1 691 aa17.33■□□□□ 0.36
AC004987.2-201ENST00000395959 SCN5AQ14524 2016 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 TRIM21P19474 475 aaKnown RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 SLC9A1P19634 815 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 IBSPP21815 317 aaPredicted RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 RFX1P22670 979 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 PAX3P23760 479 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 KCNJ6P48051 423 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 GLRA4Q5JXX5 417 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 SMYD5Q6GMV2 418 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 TRIM65Q6PJ69 517 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 C16orf59Q7L2K0 433 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 PPFIBP1Q86W92 1011 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 LMO3Q8TAP4 145 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 DDX27Q96GQ7 796 aaKnown RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 UROC1Q96N76 676 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 LSM14BQ9BX40 385 aaKnown RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 MRPL9Q9BYD2 267 aaKnown RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 MTIF3Q9H2K0 278 aaKnown RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
AC004987.2-201ENST00000395959 CITO14578 2027 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 VNN1O95497 513 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 STAU1O95793 577 aaKnown RBP17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 CST3P01034 146 aaPredicted RBP17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 ITGB3P05106 788 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 KRT19P08727 400 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 SYN1P17600 705 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 LRPAP1P30533 357 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 PNPLA4P41247 253 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 SCNN1GP51170 649 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 MYO1EQ12965 1108 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 CLLU1OSQ5K130 101 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 KLHDC7AQ5VTJ3 777 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 ZNF365Q70YC5 407 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 TMC6Q7Z403 805 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 LRRC52Q8N7C0 313 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 HELQQ8TDG4 1101 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 SEMA4DQ92854 862 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 C18orf25Q96B23 403 aaPredicted RBP17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 NT5C1BQ96P26 610 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 CXCL16Q9H2A7 254 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 VRTNQ9H8Y1 702 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 MIOSQ9NXC5 875 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 APEX2Q9UBZ4 518 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 SIX4Q9UIU6 781 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 AGAP1Q9UPQ3 857 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 INPP5FQ9Y2H2 1132 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 ALPK3Q96L96 1907 aa17.31■□□□□ 0.36
AC004987.2-201ENST00000395959 A0A1W2PQJ5 194 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 ANO9A1A5B4 782 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 PIRO00625 290 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 ASS1P00966 412 aaKnown RBP17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 POMCP01189 267 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 FGFR1P11362 822 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 TUSC3Q13454 348 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 NAB2Q15742 525 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 TMEM240Q5SV17 173 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 C9orf57Q5W0N0 161 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 ENOSF1Q7L5Y1 443 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 OTOP2Q7RTS6 562 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 HERVK_113Q902F9 699 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 HPDLQ96IR7 371 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 PDLIM2Q96JY6 352 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 CASD1Q96PB1 797 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 FAM193BQ96PV7 902 aaPredicted RBP17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 RNF19AQ9NV58 838 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 TTC3P53804 2025 aa17.3■□□□□ 0.36
AC004987.2-201ENST00000395959 DGKIO75912 1065 aa17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 P4HA1P13674 534 aa17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 UCHL3P15374 230 aa17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 POLR2BP30876 1174 aaKnown RBP17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 KLK7P49862 253 aa17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 AFF1P51825 1210 aaKnown RBP17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 MYL6P60660 151 aa17.29■□□□□ 0.36
AC004987.2-201ENST00000395959 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms