RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 GCNT1Q02742 428 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 MBTPS1Q14703 1052 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 SFMBT2Q5VUG0 894 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 TMTC1Q8IUR5 882 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 TMEM139Q8IV31 216 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 EFCAB13Q8IY85 973 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 C17orf53Q8N3J3 647 aaPredicted RBP14.74□□□□□ -0.05
VAPB-202ENST00000395802 OR5B17Q8NGF7 314 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
VAPB-202ENST00000395802 NLRC4Q9NPP4 1024 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 BZW2Q9Y6E2 419 aaKnown RBP14.74□□□□□ -0.05
VAPB-202ENST00000395802 PTPRJQ12913 1337 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 CITO14578 2027 aa14.74□□□□□ -0.05
VAPB-202ENST00000395802 CXCL10P02778 98 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 KRT19P08727 400 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 ACTN1P12814 892 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 HNRNPH3P31942 346 aaKnown RBP14.73□□□□□ -0.05
VAPB-202ENST00000395802 STAT1P42224 750 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 WNT7BP56706 349 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 CDK17Q00537 523 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 MYO1EQ12965 1108 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 RAPGEF1Q13905 1077 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 LRRC26Q2I0M4 334 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 CYP26C1Q6V0L0 522 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 PPM1KQ8N3J5 372 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 UBE2TQ9NPD8 197 aaPredicted RBP14.73□□□□□ -0.05
VAPB-202ENST00000395802 DPP3Q9NY33 737 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 DNAJC12Q9UKB3 198 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 SMIM28A0A1B0GU29 152 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 ARHGAP6O43182 974 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 NBNO60934 754 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 BAP1Q92560 729 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 PPP1R12CQ9BZL4 782 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 FAM124BQ9H5Z6 455 aaPredicted RBP14.73□□□□□ -0.05
VAPB-202ENST00000395802 ELAC1Q9H777 363 aaKnown RBP14.73□□□□□ -0.05
VAPB-202ENST00000395802 RSAD1Q9HA92 442 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 SIX2Q9NPC8 291 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 SPTLC3Q9NUV7 552 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 PRKAG2Q9UGJ0 569 aa14.73□□□□□ -0.05
VAPB-202ENST00000395802 LRRC53A6NM62 1247 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 EPHB6O15197 1021 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
VAPB-202ENST00000395802 TIMP1P01033 207 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 PFKMP08237 780 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 PNPLA4P41247 253 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 YWHAEP62258 255 aaKnown RBP14.72□□□□□ -0.05
VAPB-202ENST00000395802 NOP14P78316 857 aaKnown RBP14.72□□□□□ -0.05
VAPB-202ENST00000395802 ZNF699Q32M78 642 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 IQCEQ6IPM2 695 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 PHLDB3Q6NSJ2 640 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 PDXDC1Q6P996 788 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 ECHDC2Q86YB7 292 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 SEMA4DQ92854 862 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 VRTNQ9H8Y1 702 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 AIPL1Q9NZN9 384 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 FHOD1Q9Y613 1164 aa14.72□□□□□ -0.05
VAPB-202ENST00000395802 C9IYK1 514 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 KIAA0355O15063 1070 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 HOXA2O43364 376 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 MGEA5O60502 916 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 VNN1O95497 513 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 STAU1O95793 577 aaKnown RBP14.71□□□□□ -0.05
VAPB-202ENST00000395802 ITGB3P05106 788 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 THP07101 528 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 FERP16591 822 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 KCNJ6P48051 423 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 CCL23P55773 120 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 FAM189BP81408 668 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 ZBTB6Q15916 424 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 MEA1Q16626 185 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 DPY19L2P1Q6NXN4 242 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 RPUSD2Q8IZ73 545 aaKnown RBP14.71□□□□□ -0.05
VAPB-202ENST00000395802 TMEM199Q8N511 208 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 TTC39CQ8N584 583 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 LRRC52Q8N7C0 313 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 C1orf127Q8N9H9 656 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 DBF4BQ8NFT6 615 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 KANSL3Q9P2N6 904 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 RALGAPA2Q2PPJ7 1873 aa14.71□□□□□ -0.05
VAPB-202ENST00000395802 ARL5CA6NH57 179 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 F8VZ95 297 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 RNF225M0QZC1 329 aaPredicted RBP14.71□□□□□ -0.06
VAPB-202ENST00000395802 EFCAB14O75071 495 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 IPO7O95373 1038 aaKnown RBP14.71□□□□□ -0.06
VAPB-202ENST00000395802 CST3P01034 146 aaPredicted RBP14.71□□□□□ -0.06
VAPB-202ENST00000395802 RAG1P15918 1043 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 FECHP22830 423 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 CYP2C18P33260 490 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 JAM2P57087 298 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 IKBKEQ14164 716 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 ZNF667Q5HYK9 610 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 GLB1LQ6UWU2 654 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 VPS36Q86VN1 386 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 CCDC170Q8IYT3 715 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 RNF169Q8NCN4 708 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 HELQQ8TDG4 1101 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 ZNF560Q96MR9 790 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 WNT8AQ9H1J5 351 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms