RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FBXL18Q96ME1 805 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 TSPAN18Q96SJ8 248 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 HERC2P3Q9BVR0 1158 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 TLE6Q9H808 572 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 CGNQ9P2M7 1197 aaKnown RBP17.96■□□□□ 0.47
CXCL1-201ENST00000395761 EYSQ5T1H1 3165 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 ZNF233A6NK53 670 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 I3L4J1 428 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 PDXKO00764 312 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 IL18RAPO95256 599 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 CYP3A5P20815 502 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 CA8P35219 290 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 PRCPP42785 496 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 BRCC3P46736 316 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 NRIP1P48552 1158 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 KIAA0319Q5VV43 1072 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 SPATA1Q5VX52 437 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 GOLGA5Q8TBA6 731 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 CHST7Q9NS84 486 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 DMAC2Q9NW81 257 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 DERAQ9Y315 318 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 C2CD2Q9Y426 696 aa17.95■□□□□ 0.46
CXCL1-201ENST00000395761 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.94■□□□□ 0.46
CXCL1-201ENST00000395761 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 C2CD2LO14523 706 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 PPEF2O14830 753 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 LINC01565O15544 149 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 LILRB3O75022 631 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 KIF20AO95235 890 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 BMP6P22004 513 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 LRPAP1P30533 357 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 RBM10P98175 930 aaKnown RBP17.94■□□□□ 0.46
CXCL1-201ENST00000395761 SNRNP35Q16560 246 aaKnown RBP17.94■□□□□ 0.46
CXCL1-201ENST00000395761 FAM171A1Q5VUB5 890 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 CLSTN2Q9H4D0 955 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 KIAA1586Q9HCI6 787 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 STK39Q9UEW8 545 aa17.94■□□□□ 0.46
CXCL1-201ENST00000395761 SF3B1O75533 1304 aaKnown RBP eCLIP17.94■□□□□ 0.46
CXCL1-201ENST00000395761 ANK1P16157 1881 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 PDCD11Q14690 1871 aaKnown RBP17.93■□□□□ 0.46
CXCL1-201ENST00000395761 BIN1O00499 593 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 XPOTO43592 962 aaKnown RBP17.93■□□□□ 0.46
CXCL1-201ENST00000395761 EXOC3O60645 756 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 NR3C1P04150 777 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 GLUD2P49448 558 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 TFAMQ00059 246 aaKnown RBP17.93■□□□□ 0.46
CXCL1-201ENST00000395761 DSG1Q02413 1049 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 BMS1Q14692 1282 aaKnown RBP17.93■□□□□ 0.46
CXCL1-201ENST00000395761 DUSP6Q16828 381 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 USP41Q3LFD5 358 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 RTP2Q5QGT7 225 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 LMBRD2Q68DH5 695 aaPredicted RBP17.93■□□□□ 0.46
CXCL1-201ENST00000395761 SCARA3Q6AZY7 606 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 BEST2Q8NFU1 509 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 VN1R2Q8NFZ6 395 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 MRPL17Q9NRX2 175 aaKnown RBP17.93■□□□□ 0.46
CXCL1-201ENST00000395761 DPP3Q9NY33 737 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 TRAF3IP3Q9Y228 551 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 IRAK3Q9Y616 596 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 PTPRJQ12913 1337 aa17.93■□□□□ 0.46
CXCL1-201ENST00000395761 CALUO43852 315 aaPredicted RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CLASP2O75122 1294 aaKnown RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 URODP06132 367 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CD44P16070 742 aaKnown RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CASP4P49662 377 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CYP24A1Q07973 514 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 ADAM15Q13444 863 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 MORC3Q14149 939 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 COL19A1Q14993 1142 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 ZCWPW2Q504Y3 356 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 COBLL1Q53SF7 1204 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 C9orf57Q5W0N0 161 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 KIAA1841Q6NSI8 718 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 PRSS55Q6UWB4 352 aaPredicted RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 SLC9A9Q8IVB4 645 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 ADSSL1Q8N142 457 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 TMEM174Q8WUU8 243 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 RIN2Q8WYP3 895 aaPredicted RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 PPP2R3CQ969Q6 453 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 CCDC127Q96BQ5 260 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 MFSD14AQ96MC6 490 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 POP1Q99575 1024 aaKnown RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 TTPALQ9BTX7 342 aa17.92■□□□□ 0.46
CXCL1-201ENST00000395761 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
CXCL1-201ENST00000395761 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 ANO9A1A5B4 782 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 PIRO00625 290 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 CNPP09543 421 aaKnown RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 FGFR3P22607 806 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 TKTP29401 623 aaKnown RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 LTBRP36941 435 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 TFF2Q03403 129 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 DLX2Q07687 328 aaPredicted RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 ELAVL2Q12926 359 aaKnown RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 EP400NLQ6ZTU2 488 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 NT5DC4Q86YG4 428 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms