RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TTLL7Q6ZT98 887 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 DHX32Q7L7V1 743 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 CCDC110Q8TBZ0 833 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 EYA3Q99504 573 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ZNF518BQ9C0D4 1074 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ZCWPW1Q9H0M4 648 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 MAP4K5Q9Y4K4 846 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGB2Q9Y5G2 931 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 SCAPERQ9BY12 1400 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 A0A1B0GWJ7 208 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 H0YIN7 160 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 KPNA5O15131 536 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 NIPSNAP2O75323 286 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 PTP4A3O75365 173 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CLN5O75503 358 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 FLOT1O75955 427 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 RECQL4O94761 1208 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 EGFRP00533 1210 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ALBP02768 609 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GCFC2P16383 781 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 ARF4P18085 180 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 FUT4P22083 530 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 IL10P22301 178 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 PTGS2P35354 604 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 WNT5AP41221 380 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 MAP4K2Q12851 820 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 DHCR24Q15392 516 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TSTQ16762 297 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 HADHQ16836 314 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 AAK1Q2M2I8 961 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 HABP4Q5JVS0 413 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 ZMYM1Q5SVZ6 1142 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 KLC3Q6P597 504 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 AAGABQ6PD74 315 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 PTF1AQ7RTS3 328 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GMCL1P1Q8NEA9 526 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 OR9A1PQ8NGU1 263 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 SPPL3Q8TCT6 385 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TRPC4APQ8TEL6 797 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 LTV1Q96GA3 475 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 RHOVQ96L33 236 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ATP6V0BQ99437 205 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 RUSC1Q9BVN2 902 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 NT5C1AQ9BXI3 368 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 AP5M1Q9H0R1 490 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 MAGEH1Q9H213 219 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TRPS1Q9UHF7 1281 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 LRFN2Q9ULH4 789 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TLL2Q9Y6L7 1015 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CUX1P39880 1505 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TTC21AQ8NDW8 1320 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GOLGA6L19H0YKK7 550 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 L7N2F9 121 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 RANBP6O60518 1105 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 RB1P06400 928 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 DLATP10515 647 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 METAP1P53582 386 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CSNK2BP67870 215 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 OTUD4Q01804 1114 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 CETN1Q12798 172 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TFCP2Q12800 502 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 HNRNPDQ14103 355 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 TMEM240Q5SV17 173 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TMTC4Q5T4D3 741 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GRTP1Q5TC63 336 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TWF2Q6IBS0 349 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 LRRC69Q6ZNQ3 347 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 MICALCLQ6ZW33 695 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GPR142Q7Z601 462 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ZNF598Q86UK7 904 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 C10orf53Q8N6V4 93 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 KDF1Q8NAX2 398 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 EGLN2Q96KS0 407 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 RGL1Q9NZL6 768 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ZMYND8Q9ULU4 1186 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 ATP8B3O60423 1300 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 LRRIQ4A6NIV6 560 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 NUDT19A8MXV4 375 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ZEB2O60315 1214 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CCNT1O60563 726 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 NPTXRO95502 500 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ZBED1O96006 694 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GJB1P08034 283 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GLI1P08151 1106 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 DDX5P17844 614 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 SFPQP23246 707 aaKnown RBP eCLIP4.54□□□□□ -1.68
HERC4-204ENST00000395198 GBP2P32456 591 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 HTR2BP41595 481 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 HUNKP57058 714 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 PSMC6P62333 389 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GTF2IP78347 998 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GCNT1Q02742 428 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CCINQ13939 588 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 BCL2A1Q16548 175 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 DRICH1Q6PGQ1 229 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 ERO1BQ86YB8 467 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GATAD2AQ86YP4 633 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.54□□□□□ -1.68
HERC4-204ENST00000395198 FAM13CQ8NE31 585 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 HSPBAP1Q96EW2 488 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms