RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 KIFAP3Q92845 792 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 BICD1Q96G01 975 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 GMLQ99445 158 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 DEFB129Q9H1M3 183 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 GABBR1Q9UBS5 961 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 EXOC7Q9UPT5 735 aa21.98■■□□□ 1.11
CLK3-202ENST00000395066 RALAP11233 206 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 CRYMQ14894 314 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 AGAP1Q9UPQ3 857 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 A0A1B0GUA9 196 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 WDR64B1ANS9 1081 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 SNX3O60493 162 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 ASNSP08243 561 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 UNGP13051 313 aaPredicted RBP21.97■■□□□ 1.11
CLK3-202ENST00000395066 ADCY8P40145 1251 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 SCARA3Q6AZY7 606 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 NIPA1Q7RTP0 329 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 MFSD14AQ96MC6 490 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 IWS1Q96ST2 819 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 PDCD2LQ9BRP1 358 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 USTQ9Y2C2 406 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 RIPK3Q9Y572 518 aa21.97■■□□□ 1.11
CLK3-202ENST00000395066 PMM2O15305 246 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 MCF2L2Q86YR7 1114 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 STAMBPL1Q96FJ0 436 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 SNF8Q96H20 258 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 RUNDC3BQ96NL0 473 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 C11orf70Q9BRQ4 267 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 MYPNQ86TC9 1320 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 SSR1P43307 286 aaKnown RBP21.96■■□□□ 1.11
CLK3-202ENST00000395066 TAS2R40P59535 323 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 ARHGEF16Q5VV41 709 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 TRMT10CQ7L0Y3 403 aaKnown RBP21.96■■□□□ 1.11
CLK3-202ENST00000395066 C9orf72Q96LT7 481 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 DCLK3Q9C098 648 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 EBF2Q9HAK2 575 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 WHRNQ9P202 907 aa21.96■■□□□ 1.11
CLK3-202ENST00000395066 THAP12O43422 761 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 UBOX5O94941 541 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 CD58P19256 250 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 MFSD5Q6N075 450 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 TAS1R3Q7RTX0 852 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 DDX27Q96GQ7 796 aaKnown RBP21.95■■□□□ 1.11
CLK3-202ENST00000395066 SLC38A10Q9HBR0 1119 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 PXMP2Q9NR77 195 aa21.95■■□□□ 1.11
CLK3-202ENST00000395066 PTPRJQ12913 1337 aa21.95■■□□□ 1.1
CLK3-202ENST00000395066 OAS1P00973 400 aaKnown RBP21.95■■□□□ 1.1
CLK3-202ENST00000395066 ACOT2P49753 483 aa21.95■■□□□ 1.1
CLK3-202ENST00000395066 NUGGCQ68CJ6 796 aa21.95■■□□□ 1.1
CLK3-202ENST00000395066 RSRC1Q96IZ7 334 aaKnown RBP21.95■■□□□ 1.1
CLK3-202ENST00000395066 HOMER3Q9NSC5 361 aa21.95■■□□□ 1.1
CLK3-202ENST00000395066 CHRM1P11229 460 aaPredicted RBP21.94■■□□□ 1.1
CLK3-202ENST00000395066 ATF2P15336 505 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 ZNF268Q14587 947 aaPredicted RBP21.94■■□□□ 1.1
CLK3-202ENST00000395066 HP1BP3Q5SSJ5 553 aaPredicted RBP21.94■■□□□ 1.1
CLK3-202ENST00000395066 GPD1LQ8N335 351 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 CCHCR1Q8TD31 782 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 FBXL18Q96ME1 805 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 C1orf112Q9NSG2 853 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 NINJ2Q9NZG7 142 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 USP15Q9Y4E8 981 aaPredicted RBP21.94■■□□□ 1.1
CLK3-202ENST00000395066 DOCK5Q9H7D0 1870 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 TTC4O95801 387 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 NQO1P15559 274 aaKnown RBP21.94■■□□□ 1.1
CLK3-202ENST00000395066 NCALDP61601 193 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 MYO1EQ12965 1108 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 SWSAP1Q6NVH7 229 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 ANAPC5Q9UJX4 755 aa21.94■■□□□ 1.1
CLK3-202ENST00000395066 DSG3P32926 999 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 KCNJ2P63252 427 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 BAATQ14032 418 aaPredicted RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 ATP13A4Q4VNC1 1196 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 ROPN1BQ9BZX4 212 aaPredicted RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 ROPN1Q9HAT0 212 aaPredicted RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 PGAP2Q9UHJ9 254 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 TCF4P15884 667 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 TNNI1P19237 187 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 ITIH2P19823 946 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 JAK3P52333 1124 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 PTK6Q13882 451 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 TMC2Q8TDI7 906 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 NSMCE1Q8WV22 266 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 MOV10L1Q9BXT6 1211 aaKnown RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 XPNPEP1Q9NQW7 623 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 ANKEF1Q9NU02 776 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 SEPT9Q9UHD8 586 aaPredicted RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 L3MBTL1Q9Y468 752 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 PI4K2BG5E9Z4 385 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 WNT10BO00744 389 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 TBC1D12O60347 775 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 BRAFP15056 766 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 NSFP46459 744 aaKnown RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 NLRP11P59045 1033 aaKnown RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 SNRPFP62306 86 aaKnown RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 MTMR2Q13614 643 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 SEZ6Q53EL9 994 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 ZBTB41Q5SVQ8 909 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 SRRM1Q8IYB3 904 aaKnown RBP21.93■■□□□ 1.1
CLK3-202ENST00000395066 GLIS1Q8NBF1 620 aa21.93■■□□□ 1.1
CLK3-202ENST00000395066 SLCO2A1Q92959 643 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms