RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 RXRBP28702 533 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 MSH2P43246 934 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 SNX1Q13596 522 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 SPARCL1Q14515 664 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 LRRC14Q15048 493 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 RASA2Q15283 850 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 KYNUQ16719 465 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 GRIPAP1Q4V328 841 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 RGS9BPQ6ZS82 235 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 ZCCHC9Q8N567 271 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 EXD1Q8NHP7 514 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 CFAP61Q8NHU2 1237 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 DDX1Q92499 740 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 RBM41Q96IZ5 413 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 AGO4Q9HCK5 861 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 UBIAD1Q9Y5Z9 338 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 USH1CQ9Y6N9 552 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 WDR64B1ANS9 1081 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 SLC16A4O15374 487 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 MAGEB2O15479 319 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 PRPF4O43172 522 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■□□□ 13.1
UBE2D3-208ENST00000394803 ANP32DO95626 131 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 ADRB2P07550 413 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 UNGP13051 313 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 CALRP27797 417 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 CNGA1P29973 690 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 ALDH5A1P51649 535 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 UBXN2AP68543 259 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 RNASELQ05823 741 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 MTMR1Q13613 665 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 IZUMO3Q5VZ72 239 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 GPD1LQ8N335 351 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 INPP5DQ92835 1189 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 CCPG1Q9ULG6 757 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 RASA4BC9J798 803 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 DDX39AO00148 427 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 RASA4O43374 803 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 UNC5CO95185 931 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 CCNG1P51959 295 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 RTP1P59025 263 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 MCL1Q07820 350 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 CYP24A1Q07973 514 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 MYO1EQ12965 1108 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 BRDTQ58F21 947 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 XKR9Q5GH70 373 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 FAM102BQ5T8I3 360 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 XRRA1Q6P2D8 792 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 DRICH1Q6PGQ1 229 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 ASRGL1Q7L266 308 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 MAEAQ7L5Y9 396 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 GSTA5Q7RTV2 222 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 CBWD2Q8IUF1 395 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 NSMCE1Q8WV22 266 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 FAM151AQ8WW52 585 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 KAT5Q92993 513 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 BTBD6Q96KE9 485 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 TMEM237Q96Q45 408 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 PHACTR1Q9C0D0 580 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 TDRD3Q9H7E2 651 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 NAALADL1Q9UQQ1 740 aa10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 ZNF646O15015 1829 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-208ENST00000394803 EXOC1LA0A1B0GW35 172 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 DHX15O43143 795 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 TBC1D12O60347 775 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 ATP2A2P16615 1042 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 ITGB5P18084 799 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 CHKAP35790 457 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 ECE1P42892 770 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 MAGEA4P43358 317 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 POLGP54098 1239 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 YARSP54577 528 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 KLF1Q13351 362 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 NAA25Q14CX7 972 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 STYK1Q6J9G0 422 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 PCGF5Q86SE9 256 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SRRM1Q8IYB3 904 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 RCOR2Q8IZ40 523 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 TMEM161BQ8NDZ6 487 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 ZNF398Q8TD17 642 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SH3TC2Q8TF17 1288 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 POMGNT1Q8WZA1 660 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SEMA4DQ92854 862 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 CCDC127Q96BQ5 260 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SMC6Q96SB8 1091 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 NTPCRQ9BSD7 190 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 TUBB6Q9BUF5 446 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 OSBPL8Q9BZF1 889 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SSU72Q9NP77 194 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms