RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 A0A0B4J269 797 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 ZNF233A6NK53 670 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 TOM1L1O75674 476 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 LDHAP00338 332 aaKnown RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 FGFR1P11362 822 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 SKIP12755 728 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 POLR2FP61218 127 aaKnown RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 APBA1Q02410 837 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 C1orf220Q5T0J3 134 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 EEF1DP3Q658K8 133 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 E4F1Q66K89 784 aaPredicted RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 PDXDC1Q6P996 788 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 CYP26C1Q6V0L0 522 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 USP37Q86T82 979 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 TMTC1Q8IUR5 882 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 SMG8Q8ND04 991 aaKnown RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 TMC2Q8TDI7 906 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 BAP1Q92560 729 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 CCDC127Q96BQ5 260 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 MFSD14AQ96MC6 490 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 TTYH1Q9H313 450 aaPredicted RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 PTPRHQ9HD43 1115 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 ZNHIT6Q9NWK9 470 aaKnown RBP14.66□□□□□ -0.06
PTN-202ENST00000393083 RALGAPA2Q2PPJ7 1873 aa14.66□□□□□ -0.06
PTN-202ENST00000393083 CHD9Q3L8U1 2897 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 TMEM265A0A087WTH1 108 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 LRRC53A6NM62 1247 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 USP27XA6NNY8 438 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 LRRIQ3A6PVS8 624 aaPredicted RBP14.65□□□□□ -0.06
PTN-202ENST00000393083 MEIS3P2A8K0S8 358 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 CLDN3O15551 220 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 CLCN1P35523 988 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 GCLMP48507 274 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 ACOT2P49753 483 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 MXI1P50539 228 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 TAP1Q03518 808 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 ENPEPQ07075 957 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 MTF1Q14872 753 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 MEA1Q16626 185 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 CLLU1OSQ5K130 101 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 SLC27A1Q6PCB7 646 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 RAD9BQ6WBX8 426 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 RRAGAQ7L523 313 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 CCAR2Q8N163 923 aaKnown RBP14.65□□□□□ -0.06
PTN-202ENST00000393083 PARD3BQ8TEW8 1205 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 LPPQ93052 612 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 INTS2Q9H0H0 1204 aaKnown RBP14.65□□□□□ -0.06
PTN-202ENST00000393083 SIX2Q9NPC8 291 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 TNFSF13BQ9Y275 285 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 IPPQ9Y573 584 aa14.65□□□□□ -0.06
PTN-202ENST00000393083 LINC01553A4QN01 128 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 ABLIM1O14639 778 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 P4HA2O15460 535 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 NPTXRO95502 500 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 LINC00271P0C7V0 271 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 PROZP22891 400 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 CETN1Q12798 172 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 ZNF568Q3ZCX4 644 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 KLHDC7AQ5VTJ3 777 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 DPY19L2P1Q6NXN4 242 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TRIM65Q6PJ69 517 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 WDR59Q6PJI9 974 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 MPZL3Q6UWV2 235 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 AGMOQ6ZNB7 445 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TOGARAM2Q6ZUX3 1019 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 CMTR2Q8IYT2 770 aaKnown RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 RNF169Q8NCN4 708 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 CASD1Q96PB1 797 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TCHPQ9BT92 498 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 SLC28A3Q9HAS3 691 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TOPORSQ9NS56 1045 aaPredicted RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 KCND1Q9NSA2 647 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TRMT1Q9NXH9 659 aaKnown RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 RBAKQ9NYW8 714 aaPredicted RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 HES2Q9Y543 173 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 FHOD1Q9Y613 1164 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 CDH23Q9H251 3354 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 CCP110O43303 1012 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 DLATP10515 647 aaKnown RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 UCHL3P15374 230 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 MCL1Q07820 350 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 PSMD6Q15008 389 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 PPP2R2DQ66LE6 453 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 CRELD2Q6UXH1 353 aaPredicted RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 CHP1Q99653 195 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TMEM117Q9H0C3 514 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 NUCKS1Q9H1E3 243 aaKnown RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 NXF3Q9H4D5 531 aaKnown RBP14.64□□□□□ -0.07
PTN-202ENST00000393083 ZNF576Q9H609 170 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 TMEM8AQ9HCN3 771 aa14.64□□□□□ -0.07
PTN-202ENST00000393083 CHD7Q9P2D1 2997 aa14.63□□□□□ -0.07
PTN-202ENST00000393083 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms