RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 MAF1Q9H063 256 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 VNN1O95497 513 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 ATP4AP20648 1035 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 MAN1A1P33908 653 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 NAMPTP43490 491 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 ACOT2P49753 483 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 LLGL1Q15334 1064 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 SPOPLQ6IQ16 392 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 CRELD2Q6UXH1 353 aaPredicted RBP13.13□□□□□ -0.31
RFC5-201ENST00000392542 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
RFC5-201ENST00000392542 MON1BQ7L1V2 547 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 ASAP3Q8TDY4 903 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
RFC5-201ENST00000392542 HAPLN2Q9GZV7 340 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 PORCNQ9H237 461 aa13.13□□□□□ -0.31
RFC5-201ENST00000392542 MAFBQ9Y5Q3 323 aaPredicted RBP13.13□□□□□ -0.31
RFC5-201ENST00000392542 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 SMIM23A6NLE4 172 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 PROSCO94903 275 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 OATP04181 439 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 CHN1P15882 459 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 GLRA2P23416 452 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 SP2Q02086 613 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 PTP4A2Q12974 167 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 CUL2Q13617 745 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 PTK6Q13882 451 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 RNF187Q5TA31 235 aaPredicted RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 LIN9Q5TKA1 542 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 SLFN12LQ6IEE8 588 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 TRIM72Q6ZMU5 477 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 UHMK1Q8TAS1 419 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 DEPTORQ8TB45 409 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 EPS8L3Q8TE67 593 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 KAT2BQ92831 832 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 SELENOSQ9BQE4 189 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 STMN4Q9H169 189 aaPredicted RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 ADAM7Q9H2U9 754 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ZNF302Q9NR11 478 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 RBAKQ9NYW8 714 aaPredicted RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
RFC5-201ENST00000392542 CAPN7Q9Y6W3 813 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 UMODL1Q5DID0 1318 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ATG7O95352 703 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 LDHAP00338 332 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 DRD4P21917 467 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ICAM3P32942 547 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ARL2P36404 184 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 IFI35P80217 286 aaPredicted RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 SNX1Q13596 522 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 RHBDF2Q6PJF5 856 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 CCDC25Q86WR0 208 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 GRK7Q8WTQ7 553 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 HERPUD2Q9BSE4 406 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
RFC5-201ENST00000392542 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ASIC3Q9UHC3 531 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 PCDHB4Q9Y5E5 795 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 GJA3Q9Y6H8 435 aa13.12□□□□□ -0.31
RFC5-201ENST00000392542 ZNF541Q9H0D2 1346 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 TP73O15350 636 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 ITIH2P19823 946 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 NOMO3P69849 1222 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 DRP2Q13474 957 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
RFC5-201ENST00000392542 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 ZNF526Q8TF50 670 aaPredicted RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 SNF8Q96H20 258 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 CGRRF1Q99675 332 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 ROPN1BQ9BZX4 212 aaPredicted RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 ROPN1Q9HAT0 212 aaPredicted RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 K7ERI5 159 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 PSTPIP1O43586 416 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 CLTAP09496 248 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 GNA15P30679 374 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 AUHQ13825 339 aaKnown RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 STXBP2Q15833 593 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 PRAMEF18Q5VWM3 479 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 MFSD5Q6N075 450 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms