RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 MAPK4P31152 587 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 MESDQ14696 234 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 EEF1DP3Q658K8 133 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 TMEM270Q6UE05 265 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 CDR2LQ86X02 465 aaPredicted RBP19.48■□□□□ 0.71
ACTN4-202ENST00000390009 DOCK3Q8IZD9 2030 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 LINC01465Q8N7H1 131 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 TINF2Q9BSI4 451 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 UVRAGQ9P2Y5 699 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 TTC7AQ9ULT0 858 aaPredicted RBP19.48■□□□□ 0.71
ACTN4-202ENST00000390009 COL1A2P08123 1366 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 KRIT1O00522 736 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 ASS1P00966 412 aaKnown RBP19.48■□□□□ 0.71
ACTN4-202ENST00000390009 SMPD1P17405 629 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 PHKA2P46019 1235 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 POU5F1BQ06416 359 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 DUOXA2Q1HG44 320 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 DUSP28Q4G0W2 176 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 IFT20Q8IY31 132 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 ABHD16BQ9H3Z7 469 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 VIPAS39Q9H9C1 493 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 GDF3Q9NR23 364 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 TNFSF13BQ9Y275 285 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 ZNF236Q9UL36 1845 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 MIF4GDA9UHW6 222 aaKnown RBP19.47■□□□□ 0.71
ACTN4-202ENST00000390009 H3BRB1 525 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 RAD51CO43502 376 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 HOXC6P09630 235 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 OSTNP61366 133 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 GPS2Q13227 327 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 CEP120Q8N960 986 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 ALG3Q92685 438 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 RPS6KC1Q96S38 1066 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 CDT1Q9H211 546 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 PLEKHA4Q9H4M7 779 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 TUT1Q9H6E5 874 aaKnown RBP19.47■□□□□ 0.71
ACTN4-202ENST00000390009 PRMT7Q9NVM4 692 aaPredicted RBP19.47■□□□□ 0.71
ACTN4-202ENST00000390009 CNOT8Q9UFF9 292 aaKnown RBP19.47■□□□□ 0.71
ACTN4-202ENST00000390009 CNTN6Q9UQ52 1028 aa19.47■□□□□ 0.71
ACTN4-202ENST00000390009 A0A087WZ62 844 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 ZSCAN5CA6NGD5 496 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 H3BQF6 201 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 CCDC188H7C350 402 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 FGGP02679 453 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 COMTP21964 271 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 GUCY2DQ02846 1103 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 GABPB1Q06547 395 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 ACVR2BQ13705 512 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 RBBP8NLQ8NC74 664 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 NPLOC4Q8TAT6 608 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 RNPC3Q96LT9 517 aaKnown RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 PPP1R16BQ96T49 567 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 FDXACB1Q9BRP7 624 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 EPB41L5Q9HCM4 733 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 AKT3Q9Y243 479 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 CYP1A1P04798 512 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 GNA15P30679 374 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 EPHB4P54760 987 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 MYL6P60660 151 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 TFAMQ00059 246 aaKnown RBP19.46■□□□□ 0.71
ACTN4-202ENST00000390009 FAM187BQ17R55 369 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 UBL4BQ8N7F7 174 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 CPA5Q8WXQ8 436 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 BTBD6Q96KE9 485 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 ACBD3Q9H3P7 528 aa19.46■□□□□ 0.71
ACTN4-202ENST00000390009 CSDE1O75534 798 aaKnown RBP19.45■□□□□ 0.7
ACTN4-202ENST00000390009 VTNP04004 478 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 MMP3P08254 477 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 ITGA4P13612 1032 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 TMOD1P28289 359 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 CENPCQ03188 943 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 CST9Q5W186 159 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 MTHFD1LQ6UB35 978 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 IFNLR1Q8IU57 520 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-202ENST00000390009 EFCAB13Q8IY85 973 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 MCOLN2Q8IZK6 566 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 OR6J1Q8NGC5 347 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 KRT35Q92764 455 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 ZSWIM1Q9BR11 485 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 DDX47Q9H0S4 455 aaKnown RBP19.45■□□□□ 0.7
ACTN4-202ENST00000390009 HPCAL4Q9UM19 191 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 ESYT3A0FGR9 886 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 SLC15A5A6NIM6 579 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 SART1O43290 800 aaKnown RBP19.45■□□□□ 0.7
ACTN4-202ENST00000390009 B4GALT4O60513 344 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 TMEM191BP0C7N4 346 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 HOXD8P13378 290 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-202ENST00000390009 ZNF211Q13398 564 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-202ENST00000390009 NAA35Q5VZE5 725 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 UBR7Q8N806 425 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 ZBTB9Q96C00 473 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 CYFIP2Q96F07 1278 aa19.45■□□□□ 0.7
ACTN4-202ENST00000390009 TRPM7Q96QT4 1865 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 POLR3GO15318 223 aaPredicted RBP19.44■□□□□ 0.7
ACTN4-202ENST00000390009 CXCL8P10145 99 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 NSFP46459 744 aaKnown RBP19.44■□□□□ 0.7
ACTN4-202ENST00000390009 MARCKSL1P49006 195 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 CARSP49589 748 aaKnown RBP19.44■□□□□ 0.7
ACTN4-202ENST00000390009 TRPC3Q13507 836 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 AMHR2Q16671 573 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms