RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 A0A0U1RQJ8 604 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 LOC100653049A0A140TA62 436 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 KRT34O76011 436 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 ATP6V1B1P15313 513 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 OSBPP22059 807 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 RPA1P27694 616 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PTENP60484 403 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 ACTR2P61160 394 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 MAPRE2Q15555 327 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PRPF39Q86UA1 669 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 CDKL3Q8IVW4 592 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 GPD1LQ8N335 351 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 RPS6KC1Q96S38 1066 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 GDF3Q9NR23 364 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 GGA2Q9UJY4 613 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 FAM237AA0A1B0GTK4 181 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 S100BP04271 92 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 RALAP11233 206 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 ENO3P13929 434 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 CACNB3P54284 484 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 HDAC4P56524 1084 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 BTKQ06187 659 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 GRB10Q13322 594 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 MTM1Q13496 603 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 FAM102AQ5T9C2 384 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 ZNF571Q7Z3V5 609 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 SIX6OS1Q8N1H7 587 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 DAGLBQ8NCG7 672 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 SCG3Q8WXD2 468 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 PTPRUQ92729 1446 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 E2F7Q96AV8 911 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 RHBDL2Q9NX52 303 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 SRP68Q9UHB9 627 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 CNOT7Q9UIV1 285 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 PCDHB2Q9Y5E7 798 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 E9PCH4 1651 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PTPRMP28827 1452 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 A0A0A6YYK5 440 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 SRRM3A6NNA2 597 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 M0QZ92 97 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 SMAPO00193 183 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PIK3R2O00459 728 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 WEE2P0C1S8 567 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 IL10P22301 178 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 SPDYE2Q495Y8 402 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 ZC2HC1CQ53FD0 456 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 LRRC8EQ6NSJ5 796 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 MIGA2Q7L4E1 593 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 BBS5Q8N3I7 341 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 EXT2Q93063 718 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 CEP19Q96LK0 163 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 RMDN3Q96TC7 470 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 RBAKQ9NYW8 714 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 NOD1Q9Y239 953 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 AKT3Q9Y243 479 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 KDM1AO60341 852 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 MYBL2P10244 700 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 BMP6P22004 513 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PTPN4P29074 926 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 SERPINB9P50453 376 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PSMC5P62195 406 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 ELF3P78545 371 aaPredicted RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 POU5F1BQ06416 359 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 SMAD1Q15797 465 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 MAPK6Q16659 721 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 C1orf228Q6PIY5 440 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 EIF1ADQ8N9N8 165 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 PGM2Q96G03 612 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 CCT7Q99832 543 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 OSGEPQ9NPF4 335 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 WHRNQ9P202 907 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 XPO7Q9UIA9 1087 aaKnown RBP9.11□□□□□ -0.95
PKP4-202ENST00000389759 LRCH1Q9Y2L9 728 aa9.11□□□□□ -0.95
PKP4-202ENST00000389759 NPHP4O75161 1426 aaPredicted RBP9.1□□□□□ -0.95
PKP4-202ENST00000389759 EIF3DO15371 548 aaKnown RBP eCLIP9.1□□□□□ -0.95
PKP4-202ENST00000389759 P4HA2O15460 535 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 OATP04181 439 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 CYP11B2P19099 503 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 SFNP31947 248 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
PKP4-202ENST00000389759 TMTC4Q5T4D3 741 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 LMBRD2Q68DH5 695 aaPredicted RBP9.1□□□□□ -0.95
PKP4-202ENST00000389759 NCAPG2Q86XI2 1143 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 NDUFAF2Q8N183 169 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 GALNT4Q8N4A0 578 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 ATP8B4Q8TF62 1192 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 ATXN2LQ8WWM7 1075 aaKnown RBP9.1□□□□□ -0.95
PKP4-202ENST00000389759 TATDN2Q93075 761 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 PBXIP1Q96AQ6 731 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 NLRP4Q96MN2 994 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 UBAP1LF5GYI3 381 aa9.1□□□□□ -0.95
PKP4-202ENST00000389759 FOXN3O00409 490 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms