RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 TOPORSQ9NS56 1045 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 CHST7Q9NS84 486 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 PANK4Q9NVE7 773 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 HPSEQ9Y251 543 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 HCFC2Q9Y5Z7 792 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 STYXL1Q9Y6J8 313 aa12.6□□□□□ -0.39
APOBEC3F-202ENST00000381565 NOTCH4Q99466 2003 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 A0A1B0GVL5 298 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 TTC26A0AVF1 554 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 TMEM189-UBE2V1I3L0A0 370 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 M0R296 226 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 C2CD2LO14523 706 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 OGTO15294 1046 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 URODP06132 367 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 CNPP09543 421 aaKnown RBP12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 EPCAMP16422 314 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 ADSSP30520 456 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 ABCD1P33897 745 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 CA8P35219 290 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 GLUD2P49448 558 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 CLCNKBP51801 687 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 DSG1Q02413 1049 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 EHHADHQ08426 723 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 ENOX2Q16206 610 aaKnown RBP12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 UPP1Q16831 310 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 RTP2Q5QGT7 225 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 GRAMD1CQ8IYS0 662 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 C18orf25Q96B23 403 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 C7orf25Q9BPX7 421 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 MSTO1Q9BUK6 570 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 MAGEF1Q9HAY2 307 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 TUBGCP4Q9UGJ1 667 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 KCNH3Q9ULD8 1083 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 USP15Q9Y4E8 981 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 ZDBF2Q9HCK1 2354 aa12.59□□□□□ -0.39
APOBEC3F-202ENST00000381565 NR1I2O75469 434 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 GCNT3O95395 438 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 ADRB2P07550 413 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 CLTAP09496 248 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 CMA1P23946 247 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 HOXD13P35453 343 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 CLCN4P51793 760 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 ASIC1P78348 528 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 ZXDAP98168 799 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 SPAG1Q07617 926 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 ANKRD54Q6NXT1 300 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 CCDC65Q8IXS2 484 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 ZSWIM2Q8NEG5 633 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 UROC1Q96N76 676 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 S1PR5Q9H228 398 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 BLZF1Q9H2G9 400 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 RXFP1Q9HBX9 757 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 MRPL17Q9NRX2 175 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 CDH22Q9UJ99 828 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 ATP6V1DQ9Y5K8 247 aa12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 SF3B1O75533 1304 aaKnown RBP eCLIP12.58□□□□□ -0.4
APOBEC3F-202ENST00000381565 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 TEX28O15482 410 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 PRPF6O94906 941 aaKnown RBP12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 AFMP43652 599 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 CUL4BQ13620 913 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 USP41Q3LFD5 358 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 PRSS55Q6UWB4 352 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 CRELD2Q6UXH1 353 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 SUSD6Q92537 303 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 CASP10Q92851 521 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 PBXIP1Q96AQ6 731 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 ASIC4Q96FT7 647 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 SCAND2PQ9GZW5 306 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 SLC38A7Q9NVC3 462 aa12.57□□□□□ -0.4
APOBEC3F-202ENST00000381565 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
APOBEC3F-202ENST00000381565 LACTBL1A8MY62 500 aa12.56□□□□□ -0.4
APOBEC3F-202ENST00000381565 I3L4J1 428 aa12.56□□□□□ -0.4
APOBEC3F-202ENST00000381565 PODXLO00592 558 aa12.56□□□□□ -0.4
APOBEC3F-202ENST00000381565 KLRC4O43908 158 aa12.56□□□□□ -0.4
APOBEC3F-202ENST00000381565 TADA2AO75478 443 aa12.56□□□□□ -0.4
APOBEC3F-202ENST00000381565 SLFN14P0C7P3 912 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms