RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 NOP14P78316 857 aaKnown RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 KRT83P78385 493 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 ASTE1Q2TB18 679 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 SYT10Q6XYQ8 523 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 IFIH1Q9BYX4 1025 aaKnown RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 IMPG2Q9BZV3 1241 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 SENP6Q9GZR1 1112 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 TRPV6Q9H1D0 765 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 APOBEC3GQ9HC16 384 aaKnown RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 GUCA1BQ9UMX6 200 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 ST3GAL5Q9UNP4 418 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 RCCD1A6NED2 376 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 CYP26A1O43174 497 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 RECQL4O94761 1208 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 CALCAP01258 141 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 ITGB3P05106 788 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 AXLP30530 894 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 GRM5P41594 1212 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 AP3M2P53677 418 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 YARSP54577 528 aaKnown RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 MGAT3Q09327 533 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 TMEM132DQ14C87 1099 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 CCDC122Q5T0U0 273 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 KIF12Q96FN5 646 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 AGO3Q9H9G7 860 aaKnown RBP8.61□□□□□ -1.03
ERCC8-202ENST00000381118 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 NUB1Q9Y5A7 615 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 PCDHA13Q9Y5I0 950 aa8.61□□□□□ -1.03
ERCC8-202ENST00000381118 A0A0U1RQG5 324 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 TMCO5BA8MYB1 307 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ZC3H11AO75152 810 aaKnown RBP eCLIP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 CCL5P13501 91 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 CD52P31358 61 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 PRKCIP41743 596 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 GNG11P61952 73 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 PTK7Q13308 1070 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 SLC18A3Q16572 532 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 KYAT1Q16773 422 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ZNF699Q32M78 642 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ZNF618Q5T7W0 954 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 SLC47A2Q86VL8 602 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 GLYCTKQ8IVS8 523 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 C1orf127Q8N9H9 656 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 SLC20A1Q8WUM9 679 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 JAKMIP2Q96AA8 810 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 LACRTQ9GZZ8 138 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ASB7Q9H672 318 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 PAK6Q9NQU5 681 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 DNAI1Q9UI46 699 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 IPPQ9Y573 584 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 DUSP10Q9Y6W6 482 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 MACROD2A1Z1Q3 448 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 SGPL1O95470 568 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ASS1P00966 412 aaKnown RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 CD58P19256 250 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 POLR2BP30876 1174 aaKnown RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ARHGAP25P42331 645 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 MAGEA1P43355 309 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 VAV2P52735 878 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 GCNT1Q02742 428 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 CUL2Q13617 745 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 UBXN11Q5T124 520 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 VPS36Q86VN1 386 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ZNF710Q8N1W2 664 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 LNX1Q8TBB1 728 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 SHC3Q92529 594 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 ZMAT2Q96NC0 199 aaKnown RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 PACSIN1Q9BY11 444 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
ERCC8-202ENST00000381118 SIX4Q9UIU6 781 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 PADI3Q9ULW8 664 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 DAAM1Q9Y4D1 1078 aa8.6□□□□□ -1.03
ERCC8-202ENST00000381118 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 ARVCFO00192 962 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 DNM1LO00429 736 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 KRT86O43790 486 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 LCA5LO95447 670 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 CKBP12277 381 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 ZSCAN20P17040 1043 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-202ENST00000381118 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-202ENST00000381118 PTPN11Q06124 597 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-202ENST00000381118 KIF5AQ12840 1032 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 PAK2Q13177 524 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 SGSM1Q2NKQ1 1148 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 WDR72Q3MJ13 1102 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 ZNF394Q53GI3 561 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 ZNF569Q5MCW4 686 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 FBXO47Q5MNV8 452 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 TMEM270Q6UE05 265 aa8.59□□□□□ -1.03
ERCC8-202ENST00000381118 PALB2Q86YC2 1186 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms