RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 DCAF15Q66K64 600 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 NUGGCQ68CJ6 796 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 TAS1R2Q8TE23 839 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 PRCCQ92733 491 aaPredicted RBP17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 ZNF668Q96K58 619 aaPredicted RBP17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 HEMGNQ9BXL5 484 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 CCDC134Q9H6E4 229 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 KCND2Q9NZV8 630 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 HNRNPDLO14979 420 aaKnown RBP17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 KRT5P13647 590 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 ELF1P32519 619 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 DMP1Q13316 513 aaPredicted RBP17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 CLUL1Q15846 466 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 TMEM143Q96AN5 459 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 TMEM109Q9BVC6 243 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 ANAPC7Q9UJX3 599 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 PCDHA10Q9Y5I2 948 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 GGPS1O95749 300 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 CCND2P30279 289 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 KCTD17Q8N5Z5 321 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 SHC3Q92529 594 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 FAM213AQ9BRX8 229 aa17.34■□□□□ 0.37
NKX3-1-201ENST00000380871 MTA2O94776 668 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 ITGA8P53708 1063 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 NCALDP61601 193 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 TCEAL1Q15170 157 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 SEZ6Q53EL9 994 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 MFSD5Q6N075 450 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 TAOK1Q7L7X3 1001 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 HELQQ8TDG4 1101 aa17.33■□□□□ 0.37
NKX3-1-201ENST00000380871 OAS1P00973 400 aaKnown RBP17.33■□□□□ 0.36
NKX3-1-201ENST00000380871 WDR78Q5VTH9 848 aa17.33■□□□□ 0.36
NKX3-1-201ENST00000380871 SLC16A10Q8TF71 515 aa17.33■□□□□ 0.36
NKX3-1-201ENST00000380871 MOV10L1Q9BXT6 1211 aaKnown RBP17.33■□□□□ 0.36
NKX3-1-201ENST00000380871 LRRC19Q9H756 370 aa17.33■□□□□ 0.36
NKX3-1-201ENST00000380871 GTF3C4Q9UKN8 822 aa17.33■□□□□ 0.36
NKX3-1-201ENST00000380871 GZMAP12544 262 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 TGFB2P61812 414 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 MAP3K10Q02779 954 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 CCDC60Q8IWA6 550 aaPredicted RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 DDX1Q92499 740 aaKnown RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 THOC1Q96FV9 657 aaKnown RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 TBX20Q9UMR3 447 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 GRIN3BO60391 1043 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 SCP2P22307 547 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 IVDP26440 423 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 PDE6CP51160 858 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 ZNF280AP59817 542 aaPredicted RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 KRT76Q01546 638 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 RHBDF2Q6PJF5 856 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 ANKRD35Q8N283 1001 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 CPA5Q8WXQ8 436 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 RMDN2Q96LZ7 410 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 ECT2Q9H8V3 914 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 USP15Q9Y4E8 981 aaPredicted RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 EZRP15311 586 aaKnown RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 GBP1P32455 592 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 CDR2Q01850 454 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 C4orf19Q8IY42 314 aa17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 NSUN6Q8TEA1 469 aaKnown RBP17.32■□□□□ 0.36
NKX3-1-201ENST00000380871 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 ALDH5A1P51649 535 aaPredicted RBP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 JAK3P52333 1124 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 CCDC50Q8IVM0 306 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 C12orf50Q8NA57 414 aaPredicted RBP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 NSRP1Q9H0G5 558 aaKnown RBP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 AS3MTQ9HBK9 375 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 HOMER3Q9NSC5 361 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 GJC1P36383 396 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 ACOT2P49753 483 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 MFAP3P55082 362 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 PRKCEQ02156 737 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 MYO1EQ12965 1108 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 TRMT10CQ7L0Y3 403 aaKnown RBP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 C9orf72Q96LT7 481 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 RUNDC3BQ96NL0 473 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 STMN4Q9H169 189 aaPredicted RBP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 LRRIQ4A6NIV6 560 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 FSCN2O14926 492 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 THAP12O43422 761 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 RGS20O76081 388 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 GSTA1P08263 222 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 BRAFP15056 766 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 RRM1P23921 792 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 MAPK4P31152 587 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 MYBPC2Q14324 1141 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 CGB2Q6NT52 195 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 SRRM1Q8IYB3 904 aaKnown RBP17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 STK38LQ9Y2H1 464 aa17.31■□□□□ 0.36
NKX3-1-201ENST00000380871 P4HA2O15460 535 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 TTC4O95801 387 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 MUTP22033 750 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ACTR2P61160 394 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms