RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 RAPGEF5Q92565 580 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 CREB1P16220 341 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 CHRNB2P17787 502 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 ERFP50548 548 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 ZNF131P52739 623 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 MYL6P60660 151 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 RPL7AP62424 266 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 QPCTQ16769 361 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 NUGGCQ68CJ6 796 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 RNF217Q8TC41 542 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 BORCS6Q96GS4 357 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 SAYSD1Q9NPB0 183 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 DMAC2Q9NW81 257 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 R3HDM2Q9Y2K5 976 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 MYH4Q9Y623 1939 aa11.66□□□□□ -0.54
DNMT3A-203ENST00000380746 TCF7P36402 384 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 ITGA8P53708 1063 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 TREML2Q5T2D2 321 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 GMLQ99445 158 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 EPN3Q9H201 632 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 NRBP2Q9NSY0 501 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 SLX4Q8IY92 1834 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 MIF4GDA9UHW6 222 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 STX2P32856 288 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 HSPA9P38646 679 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 MAGEA9P43362 315 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 PTENP60484 403 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 ZNF568Q3ZCX4 644 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 ARHGEF2Q92974 986 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 KCND2Q9NZV8 630 aa11.65□□□□□ -0.54
DNMT3A-203ENST00000380746 EIF4E1BA6NMX2 242 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 BANF1O75531 89 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 YY1P25490 414 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CHRNA3P32297 505 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 GTF2BQ00403 316 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 ACAD10Q6JQN1 1059 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 ZC3H18Q86VM9 953 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 R3HDMLQ9H3Y0 253 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 XPNPEP1Q9NQW7 623 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 DKC1O60832 514 aaKnown RBP eCLIP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CST3P01034 146 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CHKAP35790 457 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 RGS7P49802 495 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 ATP11AP98196 1134 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 ITIH3Q06033 890 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 GPS1Q13098 491 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 AMHR2Q16671 573 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 C1orf220Q5T0J3 134 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 NRAPQ86VF7 1730 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 ZNF513Q8N8E2 541 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 COL22A1Q8NFW1 1626 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 UBA3Q8TBC4 463 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CLMNQ96JQ2 1002 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CALR3Q96L12 384 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 SPATA33Q96N06 139 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 CYP39A1Q9NYL5 469 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 TCF4P15884 667 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 BASP1P80723 227 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 KIF22Q14807 665 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 TBC1D1Q86TI0 1168 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 C4orf33Q8N1A6 199 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 TACO1Q9BSH4 297 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 WNT8AQ9H1J5 351 aa11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-203ENST00000380746 ATRNL1Q5VV63 1379 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 A0A087WUV0 522 aaPredicted RBP11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 F8VP50 259 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 ALCAMQ13740 583 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 P3H1Q32P28 736 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 IZUMO3Q5VZ72 239 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 GPAT2Q6NUI2 795 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 ERICH1Q86X53 443 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 FAM71AQ8IYT1 594 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 ZNF516Q92618 1163 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 DCPSQ96C86 337 aaKnown RBP11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 NUB1Q9Y5A7 615 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 NFKBIEO00221 500 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 B4GALT5O43286 388 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 CORO7P57737 925 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 TAS2R40P59535 323 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 KCTD2Q14681 263 aa11.63□□□□□ -0.55
DNMT3A-203ENST00000380746 ZNF699Q32M78 642 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms