RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 KIRREL3Q8IZU9 778 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 ATXN7L3BQ96GX2 97 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 OSBPL1AQ9BXW6 950 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 SERPINB9P50453 376 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 TRADDQ15628 312 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 OLFM3Q96PB7 478 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 OSBPL8Q9BZF1 889 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 CCDC90BQ9GZT6 254 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 VCPKMTQ9H867 229 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 PIN4Q9Y237 131 aaKnown RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 USP15Q9Y4E8 981 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 ZNF197O14709 1029 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 CAMTA2O94983 1202 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 IL10P22301 178 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 SYN2Q92777 582 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 SMARCAD1Q9H4L7 1026 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 TJP2Q9UDY2 1190 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 C19orf81C9J6K1 198 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 VEPH1Q14D04 833 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 MFSD14CQ5VZR4 134 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 PPHLN1Q8NEY8 458 aaKnown RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 AGR3Q8TD06 166 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 ANKS1AQ92625 1134 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 ERGIC2Q96RQ1 377 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 TSSK1BQ9BXA7 367 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 STX18Q9P2W9 335 aaKnown RBP16.88■□□□□ 0.29
COL2A1-202ENST00000380518 TEKT2Q9UIF3 430 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 HNRNPCL2B2RXH8 293 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 SMAPO00193 183 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 PSMD3O43242 534 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 ARHGAP18Q8N392 663 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 MED15Q96RN5 788 aa16.88■□□□□ 0.29
COL2A1-202ENST00000380518 BCORL1Q5H9F3 1711 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 FAM47DPA6NHR8 397 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 DPYSL4O14531 572 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 SULT1E1P49888 294 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 LONRF1Q17RB8 773 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 LRRC8EQ6NSJ5 796 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 CATSPER1Q8NEC5 780 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 ARL8AQ96BM9 186 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 STAMBPL1Q96FJ0 436 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 MCEEQ96PE7 176 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 XPO6Q96QU8 1125 aaKnown RBP16.87■□□□□ 0.29
COL2A1-202ENST00000380518 SPAG6O75602 509 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 GFAPP14136 432 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 APPL2Q8NEU8 664 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 SH3TC2Q8TF17 1288 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 TMEM8AQ9HCN3 771 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 COMTP21964 271 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 RFC5P40937 340 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 STX3Q13277 289 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 PTK2BQ14289 1009 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 PRR5LQ6MZQ0 368 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 LZICQ8WZA0 190 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 ROPN1BQ9BZX4 212 aaPredicted RBP16.87■□□□□ 0.29
COL2A1-202ENST00000380518 ROPN1Q9HAT0 212 aaPredicted RBP16.87■□□□□ 0.29
COL2A1-202ENST00000380518 CHCHD3Q9NX63 227 aaKnown RBP16.87■□□□□ 0.29
COL2A1-202ENST00000380518 ALG6Q9Y672 507 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 RAD51CO43502 376 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 KDSRQ06136 332 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 EMC2Q15006 297 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 OR9Q1Q8NGQ5 310 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 TRIM45Q9H8W5 580 aaPredicted RBP16.87■□□□□ 0.29
COL2A1-202ENST00000380518 JMJD4Q9H9V9 463 aa16.87■□□□□ 0.29
COL2A1-202ENST00000380518 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 MAGEB2O15479 319 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 KRT4P19013 534 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 RGS7P49802 495 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ZNF200P98182 395 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ZC2HC1CQ53FD0 456 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 FBXO33Q7Z6M2 555 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 SRLQ86TD4 932 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ENGASEQ8NFI3 743 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 KRT35Q92764 455 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 NAF1Q96HR8 494 aaKnown RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 SENP2Q9HC62 589 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 KIF17Q9P2E2 1029 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 PCDHGB4Q9UN71 923 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 SLC4A7Q9Y6M7 1214 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 MAFGO15525 162 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 HLA-DRAP01903 254 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 KLHDC7AQ5VTJ3 777 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 AGGF1Q8N302 714 aaeCLIP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 MMGT1Q8N4V1 131 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 AGAP3Q96P47 875 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ACCSLQ4AC99 568 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 DNAL1Q4LDG9 190 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 CASS4Q9NQ75 786 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms