RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PROSCO94903 275 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 GSTA1P08263 222 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 FDX1P10109 184 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 IVDP26440 423 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 LIG4P49917 911 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 SF3A3Q12874 501 aaKnown RBP eCLIP17.38■□□□□ 0.374e-11■■■■■ 39.5
VPS16-203ENST00000380469 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
VPS16-203ENST00000380469 SWSAP1Q6NVH7 229 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 VSIG10LQ86VR7 867 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 BBOF1Q8ND07 529 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 ZNF516Q92618 1163 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 DDX27Q96GQ7 796 aaKnown RBP17.38■□□□□ 0.37
VPS16-203ENST00000380469 CD248Q9HCU0 757 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 ZNRF3Q9ULT6 936 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 TMEM120BA0PK00 339 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 ZNF862O60290 1169 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 NR3C2P08235 984 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 PIK3CAP42336 1068 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 KYNUQ16719 465 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 C15orf39Q6ZRI6 1047 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 ZNF365Q70YC5 407 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 TRPM8Q7Z2W7 1104 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 RHOT1Q8IXI2 618 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 NIM1KQ8IY84 436 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.38■□□□□ 0.37
VPS16-203ENST00000380469 MGARPQ8TDB4 240 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
VPS16-203ENST00000380469 HEMGNQ9BXL5 484 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 RPAP3Q9H6T3 665 aaPredicted RBP17.38■□□□□ 0.37
VPS16-203ENST00000380469 ATP6V0A4Q9HBG4 840 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 KCNK9Q9NPC2 374 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
VPS16-203ENST00000380469 KCNG1Q9UIX4 513 aa17.38■□□□□ 0.37
VPS16-203ENST00000380469 PSTPIP1O43586 416 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 SORBS3O60504 671 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 HLA-DRAP01903 254 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 CYP1A1P04798 512 aaPredicted RBP17.37■□□□□ 0.37
VPS16-203ENST00000380469 TRIM72Q6ZMU5 477 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 MTFR1LQ9H019 292 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 MRPL47Q9HD33 250 aaKnown RBP17.37■□□□□ 0.37
VPS16-203ENST00000380469 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 RALAP11233 206 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 MTMR2Q13614 643 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 PSMD6Q15008 389 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 LRRC14Q15048 493 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 CCNG2Q16589 344 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 LMBRD2Q68DH5 695 aaPredicted RBP17.37■□□□□ 0.37
VPS16-203ENST00000380469 CCDC89Q8N998 374 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 CCDC77Q9BR77 488 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 POLR3FQ9H1D9 316 aaPredicted RBP17.37■□□□□ 0.37
VPS16-203ENST00000380469 YY1AP1Q9H869 796 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 PDLIM7Q9NR12 457 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
VPS16-203ENST00000380469 DNAJC17Q9NVM6 304 aaKnown RBP17.37■□□□□ 0.37
VPS16-203ENST00000380469 SCAF8Q9UPN6 1271 aaKnown RBP17.37■□□□□ 0.37
VPS16-203ENST00000380469 VWA5AO00534 786 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 TCEA3O75764 348 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 STBD1O95210 358 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 VPS41P49754 854 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 CLDN10P78369 228 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 STRN3Q13033 797 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 MON1BQ7L1V2 547 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 ZKSCAN4Q969J2 545 aaPredicted RBP17.36■□□□□ 0.37
VPS16-203ENST00000380469 FAM84AQ96KN4 292 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 HERPUD2Q9BSE4 406 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 ADAM22Q9P0K1 906 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 ARHGAP28Q9P2N2 729 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 SLC12A4Q9UP95 1085 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 R3HDM2Q9Y2K5 976 aaKnown RBP17.36■□□□□ 0.37
VPS16-203ENST00000380469 RGPD3A6NKT7 1758 aaPredicted RBP17.36■□□□□ 0.37
VPS16-203ENST00000380469 RGPD4Q7Z3J3 1758 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 TCP11X1B4DZS4 312 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 SNX3O60493 162 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 CETN2P41208 172 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 SSR1P43307 286 aaKnown RBP17.36■□□□□ 0.37
VPS16-203ENST00000380469 ZACNQ401N2 412 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 TAS1R3Q7RTX0 852 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 VCPIP1Q96JH7 1222 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 XPNPEP1Q9NQW7 623 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 NINJ2Q9NZG7 142 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 USP15Q9Y4E8 981 aaPredicted RBP17.36■□□□□ 0.37
VPS16-203ENST00000380469 PCDHB4Q9Y5E5 795 aa17.36■□□□□ 0.37
VPS16-203ENST00000380469 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
VPS16-203ENST00000380469 C4BPAP04003 597 aaKnown RBP17.35■□□□□ 0.37
VPS16-203ENST00000380469 PRKCEQ02156 737 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 SP4Q02446 784 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 KLF1Q13351 362 aaPredicted RBP17.35■□□□□ 0.37
VPS16-203ENST00000380469 LLGL2Q6P1M3 1020 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 VSTM1Q6UX27 236 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 CEP128Q6ZU80 1094 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 KATNAL2Q8IYT4 538 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 ANKRD42Q8N9B4 389 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 C11orf70Q9BRQ4 267 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 OSBPL8Q9BZF1 889 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 JPH1Q9HDC5 661 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms