RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CFHP08603 1231 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 ATF7P17544 494 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 CHRNB2P17787 502 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 MMP13P45452 471 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 CYP4X1Q8N118 509 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 UTP4Q969X6 686 aaKnown RBP13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 IFT74Q96LB3 600 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 RMDN2Q96LZ7 410 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 TMEM237Q96Q45 408 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 C11orf70Q9BRQ4 267 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 FAM213AQ9BRX8 229 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 PLIN4Q96Q06 1357 aa13.25□□□□□ -0.29
PRPF40B-202ENST00000380281 ZSCAN5DPP0CG00 497 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 KRT10P13645 584 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 BRAFP15056 766 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 GM2AP17900 193 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 GNAZP19086 355 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 RRM1P23921 792 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 YY1P25490 414 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 TPP2P29144 1249 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 STX2P32856 288 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ITGA8P53708 1063 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 TMED2Q15363 201 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 BMT2Q1RMZ1 405 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 GALNTL6Q49A17 601 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 RHOT2Q8IXI1 618 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ZFAND2BQ8WV99 257 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 GJD4Q96KN9 370 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 FGD4Q96M96 766 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 NSRP1Q9H0G5 558 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ALG13Q9NP73 1137 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 TMOD2Q9NZR1 351 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 LRRC42Q9Y546 428 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 SYNGAP1Q96PV0 1343 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 DENND3A2RUS2 1198 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 TNNI1P19237 187 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 CHRNA3P32297 505 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ZNF131P52739 623 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 HNRNPDLO14979 420 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ETS1P14921 441 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 CYP11B1P15538 503 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ATP6V1C1P21283 382 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 GBP1P32455 592 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ACOT2P49753 483 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 PDE6CP51160 858 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 CCNG1P51959 295 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 EIF3BP55884 814 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 MPP2Q14168 576 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 DACT2Q5SW24 774 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 INTS8Q75QN2 995 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 MAIP1Q8WWC4 291 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 TUFT1Q9NNX1 390 aa13.24□□□□□ -0.29
PRPF40B-202ENST00000380281 ADAMTSL1Q8N6G6 1762 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 ZSCAN9O15535 394 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 BANF1O75531 89 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 PEX5P50542 639 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 DYNLT1P63172 113 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 FMO1Q01740 532 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 SPP2Q13103 211 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 C6orf118Q5T5N4 469 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 MYLK4Q86YV6 388 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 CCNJLQ8IV13 435 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 C4orf33Q8N1A6 199 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 C12orf65Q9H3J6 166 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 CES2O00748 559 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 EIF3DO15371 548 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 CIITAP33076 1130 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 C1orf220Q5T0J3 134 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 ACCSQ96QU6 501 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 ZNF341Q9BYN7 854 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 RNPEPL1Q9HAU8 725 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 ANAPC5Q9UJX4 755 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 NENFQ9UMX5 172 aa13.23□□□□□ -0.29
PRPF40B-202ENST00000380281 SUN1O94901 812 aa13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 RALAP11233 206 aa13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 NPR1P16066 1061 aa13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 CALB2P22676 271 aa13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 PTDSS1P48651 473 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 SCARA3Q6AZY7 606 aa13.22□□□□□ -0.29
PRPF40B-202ENST00000380281 ZNF449Q6P9G9 518 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms