RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 NFS1Q9Y697 457 aa8.34□□□□□ -1.07
CDKL5-202ENST00000379996 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.08
CDKL5-202ENST00000379996 GTPBP10A4D1E9 387 aaKnown RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 SLC16A3O15427 465 aaKnown RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 TGFB1I1O43294 461 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 USO1O60763 962 aaKnown RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 TBCAO75347 108 aaKnown RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 PALMO75781 387 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 FAM153BP0C7A2 387 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ZNF286BP0CG31 522 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 INSRRP14616 1297 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 PON1P27169 355 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 MAGEA1P43355 309 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 POU5F1Q01860 360 aaKnown RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 SNX17Q15036 470 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 FAM153CQ494X1 144 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 SLC9C1Q4G0N8 1177 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 SFMBT2Q5VUG0 894 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ZNF410Q86VK4 478 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 MMRN2Q9H8L6 949 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 FAM153AQ9UHL3 310 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 RALGAPA2Q2PPJ7 1873 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 NCANO14594 1321 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ZNF233A6NK53 670 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 CPP00450 1065 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 GJB1P08034 283 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 CCL5P13501 91 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ANXA13P27216 316 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 CXCR5P32302 372 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ACLYP53396 1101 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 POLGP54098 1239 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 KCNA1Q09470 495 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 PPFIA1Q13136 1202 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 IQCEQ6IPM2 695 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 TAF2Q6P1X5 1199 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 TRIM50Q86XT4 487 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 TPCN2Q8NHX9 752 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 SLC35C1Q96A29 364 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 HINFPQ9BQA5 517 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 A0A0A6YYK5 440 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 ZSCAN5CA6NGD5 496 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 MYO1CO00159 1063 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 AKAP3O75969 853 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 COL6A1P12109 1028 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 CDK7P50613 346 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 LBX1P52954 281 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 NPEPPSP55786 919 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 PTK2Q05397 1052 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 KCNA10Q16322 511 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 KIAA0753Q2KHM9 967 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 CASKIN2Q8WXE0 1202 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 LENG1Q96BZ8 264 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 NOX5Q96PH1 765 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 TSG101Q99816 390 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 UNC93B1Q9H1C4 597 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 C2orf40Q9H1Z8 148 aa8.33□□□□□ -1.08
CDKL5-202ENST00000379996 RRP15Q9Y3B9 282 aaKnown RBP8.33□□□□□ -1.08
CDKL5-202ENST00000379996 C17orf102A2RUQ5 167 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 PDXKO00764 312 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 MAPK13O15264 365 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 FAM13AO94988 1023 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ASGR1P07306 291 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 IVLP07476 585 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 POLR2FP61218 127 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ALS2CLQ60I27 953 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SLC9A9Q8IVB4 645 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ACTRT1Q8TDG2 376 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 LMBR1Q8WVP7 490 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ALS2CR12Q96Q35 445 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TXLNGYQ9BZA5 131 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 DMAC2Q9NW81 257 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SQORQ9Y6N5 450 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 A0A0U1RQG5 324 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 PES1O00541 588 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 BUB1O43683 1085 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 MYL3P08590 195 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ACTN1P12814 892 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 UCHL3P15374 230 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 GLRA2P23416 452 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 GJA8P48165 433 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 EFNA5P52803 228 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 CORO7P57737 925 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SP4Q02446 784 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 DMP1Q13316 513 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TRADDQ15628 312 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 GNASQ5JWF2 1037 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SERINC5Q86VE9 423 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SFR1Q86XK3 245 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms