RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NSFP46459 744 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 MRPS5P82675 430 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 SARNPP82979 210 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 KCNJ12Q14500 433 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 NTRK3Q16288 839 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 TAF1BQ53T94 588 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 OVOS1Q6IE37 1185 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 PPP1R18Q6NYC8 613 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 TC2NQ8N9U0 490 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 CCT6BQ92526 530 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 APBB2Q92870 758 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 AHCYL2Q96HN2 611 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 RAD9AQ99638 391 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 RNPEPQ9H4A4 650 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 NLRC4Q9NPP4 1024 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 PPANQ9NQ55 473 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 PFDN4Q9NQP4 134 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 BTBD7Q9P203 1132 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 UBQLN1Q9UMX0 589 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 HPSEQ9Y251 543 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 AK5Q9Y6K8 562 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 KNTC1P50748 2209 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 SF3B1O75533 1304 aaKnown RBP eCLIP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 BAZ2BQ9UIF8 2168 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 GOLGA6L7A0A1B0GV03 622 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 CCL16O15467 120 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 PAFAH1B1P43034 410 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 GLUD2P49448 558 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 CREMQ03060 361 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 PSMD5Q16401 504 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 HADHQ16836 314 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 GSPT2Q8IYD1 628 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 TRIB2Q92519 343 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 DDX27Q96GQ7 796 aaKnown RBP6.96□□□□□ -1.3
NEDD9-202ENST00000379446 CCDC42Q96M95 316 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 SELENOOQ9BVL4 669 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 MRIQ9BWK5 157 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 CYP39A1Q9NYL5 469 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 KIF1AQ12756 1690 aa6.96□□□□□ -1.3
NEDD9-202ENST00000379446 E9PMD0 336 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 HGSO14964 777 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 NCK2O43639 380 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PFKMP08237 780 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 H2AFXP16104 143 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 BMP6P22004 513 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 OR1D2P34982 312 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PRPHP41219 470 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 WASP42768 502 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SGCGQ13326 291 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 KYNUQ16719 465 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 MAP9Q49MG5 647 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 KCTD16Q68DU8 428 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PTCRAQ6ISU1 281 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 MMS22LQ6ZRQ5 1243 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TRIML1Q8N9V2 468 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 CCDC63Q8NA47 563 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 FAM76AQ8TAV0 307 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 LPPQ93052 612 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 OMDQ99983 421 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PHF20Q9BVI0 1012 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TARS2Q9BW92 718 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 L2HGDHQ9H9P8 463 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 CHST12Q9NRB3 414 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 RBPJLQ9UBG7 517 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 WDR19Q8NEZ3 1342 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PASKQ96RG2 1323 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 ADCY6O43306 1168 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 RNF40O75150 1001 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 ENDOD1O94919 500 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 GNSP15586 552 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TUFMP49411 452 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 COPB1P53618 953 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SLC12A2P55011 1212 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TRIM32Q13049 653 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 MAPRE1Q15691 268 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 FNDC3BQ53EP0 1204 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PDXDC1Q6P996 788 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 CYP26C1Q6V0L0 522 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 IFNLR1Q8IU57 520 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 MFSD14AQ96MC6 490 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 CACYBPQ9HB71 228 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 METTL14Q9HCE5 456 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 IL23AQ9NPF7 189 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TRIM49BA6NDI0 452 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 WEE2P0C1S8 567 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 LCP1P13796 627 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 EIF4BP23588 611 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 ERCC5P28715 1186 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 KRT31Q15323 416 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SERPINA13PQ6UXR4 307 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 RAD9BQ6WBX8 426 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 Q7L0L9 218 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SPATA18Q8TC71 538 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 GMCL1Q96IK5 515 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SEZ6LQ9BYH1 1024 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 ZFP14Q9HCL3 533 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms