RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CCDC188H7C350 402 aa11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 FGAP02671 866 aa11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 GSPT1P15170 499 aaKnown RBP11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 ALDH6A1Q02252 535 aaKnown RBP11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 CYP4A22Q5TCH4 519 aa11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 COMMD2Q86X83 199 aa11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 CADP27708 2225 aa11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 ENO2P09104 434 aaPredicted RBP11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 CAMK2GQ13555 558 aaPredicted RBP11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 CUL3Q13618 768 aa11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 COPS7BQ9H9Q2 264 aaPredicted RBP11.78□□□□□ -0.52
PTCHD1-201ENST00000379361 PDE8BO95263 885 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 A1BGP04217 495 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 FDX1P10109 184 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 VAMP7P51809 220 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 CACNB2Q08289 660 aaPredicted RBP11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 SHCBP1Q8NEM2 672 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 DHX35Q9H5Z1 703 aaKnown RBP11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 TADA2AO75478 443 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 TTLL9Q3SXZ7 439 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 EMBQ6PCB8 327 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 POTEAQ6S8J7 498 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 NEK10Q6ZWH5 1172 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 DGKHQ86XP1 1220 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 MYOM2P54296 1465 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 PCSK1P29120 753 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 GPC5P78333 572 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 EFL1Q7Z2Z2 1120 aaKnown RBP11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 TBC1D22BQ9NU19 505 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 NFKBIZQ9BYH8 718 aa11.77□□□□□ -0.52
PTCHD1-201ENST00000379361 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 TMEM132DQ14C87 1099 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 FAM102AQ5T9C2 384 aaPredicted RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 ARL6IP4Q66PJ3 421 aaKnown RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 PTRHD1Q6GMV3 140 aaKnown RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 ACAD9Q9H845 621 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 PARVAQ9NVD7 372 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 ATP8B1O43520 1251 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 EDRF1Q3B7T1 1238 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 JADE3Q92613 823 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 WRNIP1Q96S55 665 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 SLC39A10Q9ULF5 831 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 P4HA2O15460 535 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 GGPS1O95749 300 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 HNRNPCP07910 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 MAPKAPK2P49137 400 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 PRIM2P49643 509 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 DPP7Q9UHL4 492 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 FHOD1Q9Y613 1164 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 SMIM22K7EJ46 135 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 AP1M1Q9BXS5 423 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 TBC1D23Q9NUY8 699 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 PDIA6Q15084 440 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 SCFD2Q8WU76 684 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 USP19O94966 1318 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 IFNA14P01570 189 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 MAPK1P28482 360 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 ESRP1Q6NXG1 681 aaKnown RBP11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 ENOSF1Q7L5Y1 443 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 FAR2Q96K12 515 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
PTCHD1-201ENST00000379361 SMIM31A0A1B0GVY4 71 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 CAPN1P07384 714 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 CCT8P50990 548 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 LNPEPQ9UIQ6 1025 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 HSPBP1Q9NZL4 362 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 PRAG1Q86YV5 1406 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ZBED6P86452 979 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 RINLQ6ZS11 566 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 PLD1Q13393 1074 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 SYTL1Q8IYJ3 562 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 RBBP8Q99708 897 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 HPS4Q9NQG7 708 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 GNA15P30679 374 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 CACHD1Q5VU97 1274 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 RTL3Q8N8U3 475 aaKnown RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 STON1Q9Y6Q2 735 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ABCC4O15439 1325 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 CD4P01730 458 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 CLK1P49759 484 aaKnown RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ZCCHC8Q6NZY4 707 aaKnown RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms