RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 MKNK1Q9BUB5 465 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 LMCD1Q9NZU5 365 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 TMEM63CQ9P1W3 806 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 TRIP11Q15643 1979 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 TADA2AO75478 443 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 B3GAT3O94766 335 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 ITGB1P05556 798 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 NFICP08651 508 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 FOSL2P15408 326 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 PAX3P23760 479 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 ERCC5P28715 1186 aaPredicted RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 LRPAP1P30533 357 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 CLCNKBP51801 687 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 ENPEPQ07075 957 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 SPAG1Q07617 926 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 UPP1Q16831 310 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 DUOXA2Q1HG44 320 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 INTS8Q75QN2 995 aaKnown RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 WDR49Q8IV35 697 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 SPDYE1Q8NFV5 336 aaPredicted RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 GDPD5Q8WTR4 605 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 ANKRD36BP1Q96IX9 119 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 CEP63Q96MT8 703 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 PDE11AQ9HCR9 933 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 PRG3Q9Y2Y8 225 aaPredicted RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 ANK1P16157 1881 aa12.9□□□□□ -0.34
PCNA-201ENST00000379143 COL4A4P53420 1690 aaPredicted RBP12.9□□□□□ -0.34
PCNA-201ENST00000379143 SF3B1O75533 1304 aaKnown RBP eCLIP12.9□□□□□ -0.349e-6■■■■■ 68.9
PCNA-201ENST00000379143 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 PODXLO00592 558 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 SLC16A3O15427 465 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 AKAP3O75969 853 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 TNNC2P02585 160 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 KRT13P13646 458 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 CASP4P49662 377 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 AP3M2P53677 418 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 PMS1P54277 932 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 TTI2Q6NXR4 508 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 EFCAB13Q8IY85 973 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 POF1BQ8WVV4 589 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 MRPL38Q96DV4 380 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 TLR9Q9NR96 1032 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 ANO10Q9NW15 660 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 DPP3Q9NY33 737 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 ITGA11Q9UKX5 1188 aa12.89□□□□□ -0.35
PCNA-201ENST00000379143 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
PCNA-201ENST00000379143 TRIM49BA6NDI0 452 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 IKBKBO14920 756 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 GRM6O15303 877 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 KIF4AO95239 1232 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 GNA14O95837 355 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 DLATP10515 647 aaKnown RBP12.88□□□□□ -0.35
PCNA-201ENST00000379143 TNNI1P19237 187 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 CLDN10P78369 228 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 STX1AQ16623 288 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
PCNA-201ENST00000379143 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 PARD3BQ8TEW8 1205 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 CGRRF1Q99675 332 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 METTL14Q9HCE5 456 aaKnown RBP12.88□□□□□ -0.35
PCNA-201ENST00000379143 INTS13Q9NVM9 706 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 PLXNA4Q9HCM2 1894 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 RFXAPO00287 272 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 STX10O60499 249 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 LPXNO60711 386 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 SOD2P04179 222 aa12.88□□□□□ -0.35
PCNA-201ENST00000379143 COL9A1P20849 921 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms