RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 DHX38Q92620 1227 aaKnown RBP20.85■□□□□ 0.93
SSU72-204ENST00000378726 LRRC1Q9BTT6 524 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 PCDHGC5Q9Y5F6 944 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 MYH10P35580 1976 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 RRN3P2A6NIE6 340 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 PRLRP16471 622 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 OSTNP61366 133 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 FAM187BQ17R55 369 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 KIAA0319LQ8IZA0 1049 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 NLRP7Q8WX94 980 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 APBA2Q99767 749 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 GPBP1L1Q9HC44 474 aaPredicted RBP20.84■□□□□ 0.93
SSU72-204ENST00000378726 TAS2R14Q9NYV8 317 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 ATP8B3O60423 1300 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 CA12O43570 354 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 NCK2O43639 380 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 CTGFP29279 349 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 AP3M2P53677 418 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 IFI16Q16666 785 aaKnown RBP20.84■□□□□ 0.93
SSU72-204ENST00000378726 SPOPLQ6IQ16 392 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 NOP9Q86U38 636 aaKnown RBP20.84■□□□□ 0.93
SSU72-204ENST00000378726 WDR49Q8IV35 697 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 EPS8L1Q8TE68 723 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 SMARCAL1Q9NZC9 954 aa20.84■□□□□ 0.93
SSU72-204ENST00000378726 PCNTO95613 3336 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 ZEB2O60315 1214 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 SURF1Q15526 300 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 AMHR2Q16671 573 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 NFRKBQ6P4R8 1299 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 KAT2BQ92831 832 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 TLR10Q9BXR5 811 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 CDT1Q9H211 546 aa20.83■□□□□ 0.93
SSU72-204ENST00000378726 DMGDHQ9UI17 866 aaKnown RBP20.83■□□□□ 0.93
SSU72-204ENST00000378726 NOCTQ9UK39 431 aaKnown RBP20.83■□□□□ 0.93
SSU72-204ENST00000378726 FAM170AA1A519 330 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 GRID2IPA4D2P6 1211 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 F2P00734 622 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 CST3P01034 146 aaPredicted RBP20.82■□□□□ 0.92
SSU72-204ENST00000378726 KRT5P13647 590 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 CYP11B1P15538 503 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 CHRNB2P17787 502 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 DUOXA2Q1HG44 320 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 PAXIP1Q6ZW49 1069 aaPredicted RBP20.82■□□□□ 0.92
SSU72-204ENST00000378726 ZNF572Q7Z3I7 529 aaPredicted RBP20.82■□□□□ 0.92
SSU72-204ENST00000378726 CEP120Q8N960 986 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 PPP1R13LQ8WUF5 828 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 SCLT1Q96NL6 688 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 PSMB7Q99436 277 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 A0A0A6YYK5 440 aaPredicted RBP20.82■□□□□ 0.92
SSU72-204ENST00000378726 GPR25O00155 361 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 TMEM253P0C7T8 217 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 ABCB4P21439 1286 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 CXCR5P32302 372 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 NCOA4Q13772 614 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 SND1Q7KZF4 910 aaKnown RBP eCLIP20.82■□□□□ 0.92
SSU72-204ENST00000378726 SPATA4Q8NEY3 305 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 LMBR1Q8WVP7 490 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 CTNNBL1Q8WYA6 563 aaPredicted RBP20.82■□□□□ 0.92
SSU72-204ENST00000378726 OSBPL9Q96SU4 736 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 PCDHB18PQ96TA0 734 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 AP5M1Q9H0R1 490 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 APOBEC3GQ9HC16 384 aaKnown RBP20.82■□□□□ 0.92
SSU72-204ENST00000378726 EHD2Q9NZN4 543 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 NRCAMQ92823 1304 aa20.82■□□□□ 0.92
SSU72-204ENST00000378726 ANKRD62A6NC57 917 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 GOLGA6BA6NDN3 693 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 TMEM88BA6NKF7 163 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 ANKRD65E5RJM6 399 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 FTCDO95954 541 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 IGHA2P01877 340 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 SMIM10L2AP0DMW4 78 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 SMIM10L2BP0DMW5 78 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 SLC7A5Q01650 507 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 SCARA3Q6AZY7 606 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 CCDC70Q6NSX1 233 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 CPB2Q96IY4 423 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 HYOU1Q9Y4L1 999 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 FTLP02792 175 aaPredicted RBP20.81■□□□□ 0.92
SSU72-204ENST00000378726 MMEP08473 750 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 TCP1P17987 556 aaKnown RBP20.81■□□□□ 0.92
SSU72-204ENST00000378726 CPT1AP50416 773 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 SMC1BQ8NDV3 1235 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 MTMR12Q9C0I1 747 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 ISCUQ9H1K1 167 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 TSKSQ9UJT2 592 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 Q9Y3F1 56 aa20.81■□□□□ 0.92
SSU72-204ENST00000378726 CLSTN1O94985 981 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 ARF4P18085 180 aaPredicted RBP20.8■□□□□ 0.92
SSU72-204ENST00000378726 PDE6CP51160 858 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 BEX3Q00994 111 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 CUL2Q13617 745 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 MEI1Q5TIA1 1274 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 TMEM192Q8IY95 271 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 TPCN2Q8NHX9 752 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 SLC35G2Q8TBE7 412 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 RPF1Q9H9Y2 349 aaKnown RBP20.8■□□□□ 0.92
SSU72-204ENST00000378726 NUB1Q9Y5A7 615 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 MYL3P08590 195 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 TFAMQ00059 246 aaKnown RBP20.8■□□□□ 0.92
SSU72-204ENST00000378726 FMO1Q01740 532 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms