RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 KNOP1Q1ED39 458 aaKnown RBP23.8■■□□□ 1.4
GFRA3-202ENST00000378362 CTC1Q2NKJ3 1217 aa23.8■■□□□ 1.4
GFRA3-202ENST00000378362 DCLRE1AQ6PJP8 1040 aa23.8■■□□□ 1.4
GFRA3-202ENST00000378362 EFCAB13Q8IY85 973 aa23.8■■□□□ 1.4
GFRA3-202ENST00000378362 RNF168Q8IYW5 571 aaPredicted RBP23.8■■□□□ 1.4
GFRA3-202ENST00000378362 TMEM87AQ8NBN3 555 aa23.8■■□□□ 1.4
GFRA3-202ENST00000378362 RIN2Q8WYP3 895 aaPredicted RBP23.8■■□□□ 1.4
GFRA3-202ENST00000378362 MRPL17Q9NRX2 175 aaKnown RBP23.8■■□□□ 1.4
GFRA3-202ENST00000378362 SCN1AP35498 2009 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 CLASP2O75122 1294 aaKnown RBP23.79■■□□□ 1.4
GFRA3-202ENST00000378362 MYL1P05976 194 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 URODP06132 367 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 NDUFV1P49821 464 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 KIAA0319Q5VV43 1072 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 KANK3Q6NY19 840 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 PPP2R3CQ969Q6 453 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 HERC2P3Q9BVR0 1158 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 PDE11AQ9HCR9 933 aa23.79■■□□□ 1.4
GFRA3-202ENST00000378362 LILRB3O75022 631 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 RHOBTB3O94955 611 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 GLUD2P49448 558 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 KYAT1Q16773 422 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 PDE12Q6L8Q7 609 aaKnown RBP23.78■■□□□ 1.4
GFRA3-202ENST00000378362 CHST7Q9NS84 486 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 RBAKQ9NYW8 714 aaPredicted RBP23.78■■□□□ 1.4
GFRA3-202ENST00000378362 CLEC1BQ9P126 229 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 PCDHA5Q9Y5H7 936 aa23.78■■□□□ 1.4
GFRA3-202ENST00000378362 SF3B1O75533 1304 aaKnown RBP eCLIP23.78■■□□□ 1.4
GFRA3-202ENST00000378362 EXTL3O43909 919 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 ADRB2P07550 413 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 SPATA31D3P0C874 917 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 EPCAMP16422 314 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 TMEM132DQ14C87 1099 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 BMT2Q1RMZ1 405 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 USP41Q3LFD5 358 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 SPATA31D4Q6ZUB0 917 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 GPD1LQ8N335 351 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 EFHBQ8N7U6 833 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 CDH22Q9UJ99 828 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 HCFC2Q9Y5Z7 792 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 TKTP29401 623 aaKnown RBP23.77■■□□□ 1.4
GFRA3-202ENST00000378362 PSMD2Q13200 908 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 KLHL5Q96PQ7 755 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 UBQLN1Q9UMX0 589 aaKnown RBP23.77■■□□□ 1.4
GFRA3-202ENST00000378362 COG5Q9UP83 839 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 NUB1Q9Y5A7 615 aa23.77■■□□□ 1.4
GFRA3-202ENST00000378362 CARNS1A5YM72 827 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 TEX28O15482 410 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 KINO60870 393 aaKnown RBP23.76■■□□□ 1.39
GFRA3-202ENST00000378362 KLRC2P26717 231 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 TFAMQ00059 246 aaKnown RBP23.76■■□□□ 1.39
GFRA3-202ENST00000378362 DSG1Q02413 1049 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 BMS1Q14692 1282 aaKnown RBP23.76■■□□□ 1.39
GFRA3-202ENST00000378362 COL19A1Q14993 1142 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 CAMK4Q16566 473 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 PALB2Q86YC2 1186 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.76■■□□□ 1.39
GFRA3-202ENST00000378362 UROC1Q96N76 676 aa23.76■■□□□ 1.39
GFRA3-202ENST00000378362 MRPS5P82675 430 aaKnown RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 HS2ST1Q7LGA3 356 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 BRSK2Q8IWQ3 736 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 C12orf76Q8N812 135 aaPredicted RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 EEF2KMTQ96G04 330 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 ASB2Q96Q27 587 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 POP1Q99575 1024 aaKnown RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 TTPALQ9BTX7 342 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 KCTD10Q9H3F6 313 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 TIMM13Q9Y5L4 95 aaPredicted RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 IRAK3Q9Y616 596 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 PTPRJQ12913 1337 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 ADAM12O43184 909 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 UBE2HP62256 183 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 SPATA1Q5VX52 437 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 CCDC47Q96A33 483 aaKnown RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 DDX27Q96GQ7 796 aaKnown RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 NECAB3Q96P71 396 aaPredicted RBP23.75■■□□□ 1.39
GFRA3-202ENST00000378362 ASB7Q9H672 318 aa23.75■■□□□ 1.39
GFRA3-202ENST00000378362 UBE4BO95155 1302 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 LDHAP00338 332 aaKnown RBP23.74■■□□□ 1.39
GFRA3-202ENST00000378362 RPL9P32969 192 aaKnown RBP23.74■■□□□ 1.39
GFRA3-202ENST00000378362 MCM4P33991 863 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 KCNC3Q14003 757 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 BEST2Q8NFU1 509 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 ATXN2LQ8WWM7 1075 aaKnown RBP23.74■■□□□ 1.39
GFRA3-202ENST00000378362 CCDC127Q96BQ5 260 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 TIGD1Q96MW7 591 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 DPP3Q9NY33 737 aa23.74■■□□□ 1.39
GFRA3-202ENST00000378362 BIN1O00499 593 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 SPTLC1O15269 473 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 CDR1P51861 262 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 KCNB1Q14721 858 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 SNRNP35Q16560 246 aaKnown RBP23.73■■□□□ 1.39
GFRA3-202ENST00000378362 RSPO2Q6UXX9 243 aaPredicted RBP23.73■■□□□ 1.39
GFRA3-202ENST00000378362 LNX1Q8TBB1 728 aaPredicted RBP23.73■■□□□ 1.39
GFRA3-202ENST00000378362 SMARCE1Q969G3 411 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 ZNF233A6NK53 670 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 TMEM189-UBE2V1I3L0A0 370 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 WEE2P0C1S8 567 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 IL9P15248 144 aa23.73■■□□□ 1.39
GFRA3-202ENST00000378362 CASP4P49662 377 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms