RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 COMMD2Q86X83 199 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 RABGGTAQ92696 567 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 CNOT7Q9UIV1 285 aaKnown RBP17.16■□□□□ 0.34
RGP1-201ENST00000378078 RASSF10A6NK89 507 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 NPTXRO95502 500 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 HSD17B4P51659 736 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 MAP3K7CLP57077 242 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 ZBED6P86452 979 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 OOSP2Q86WS3 158 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 VPS50Q96JG6 964 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 PCMTD2Q9NV79 361 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 RPS7P62081 194 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 PGS1Q32NB8 556 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 SEZ6Q53EL9 994 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 MCPH1Q8NEM0 835 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 CELF1Q92879 486 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 DDX47Q9H0S4 455 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 OSGEPL1Q9H4B0 414 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 ZFYVE1Q9HBF4 777 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 JPH1Q9HDC5 661 aaPredicted RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 NMRK2Q9NPI5 230 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 PARVAQ9NVD7 372 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 XPO7Q9UIA9 1087 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 PRG3Q9Y2Y8 225 aaPredicted RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 ACADMP11310 421 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 CHI3L1P36222 383 aaPredicted RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 PCYT1AP49585 367 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 FBXW10Q5XX13 1052 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 STAG2Q8N3U4 1231 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 MAP4K1Q92918 833 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 EXOSC4Q9NPD3 245 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 ALCAMQ13740 583 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 KLHL38Q2WGJ6 581 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 DCAF6Q58WW2 860 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 ANKS6Q68DC2 871 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 PPP1R2P3Q6NXS1 205 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 CCDC137Q6PK04 289 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 RHOT2Q8IXI1 618 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 SPATA16Q9BXB7 569 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 MAP3K6O95382 1288 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 THPOP40225 353 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 ARFIP2P53365 341 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 TSC22D1Q15714 1073 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 KNOP1Q1ED39 458 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 ARHGAP17Q68EM7 881 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 SHCBP1Q8NEM2 672 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 ASAP3Q8TDY4 903 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 USP10Q14694 798 aaKnown RBP17.15■□□□□ 0.34
RGP1-201ENST00000378078 TMEM132DQ14C87 1099 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 GOLGA7BQ2TAP0 167 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 ZBTB39O15060 712 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 LRRC63Q05C16 580 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 STKLD1Q8NE28 680 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 BBS2Q9BXC9 721 aa17.15■□□□□ 0.34
RGP1-201ENST00000378078 ATMINO43313 823 aaPredicted RBP17.14■□□□□ 0.34
RGP1-201ENST00000378078 SLC30A1Q9Y6M5 507 aa17.14■□□□□ 0.34
RGP1-201ENST00000378078 RGS12O14924 1447 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 TSC22D2O75157 780 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 RASSF9O75901 435 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 HAUS5O94927 633 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
RGP1-201ENST00000378078 FOXR1Q6PIV2 292 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 TRIM69Q86WT6 500 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 CDKL3Q8IVW4 592 aaPredicted RBP17.14■□□□□ 0.33
RGP1-201ENST00000378078 PI4K2AQ9BTU6 479 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 PCDHGA4Q9Y5G9 962 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 ZNF185O15231 689 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 WEE2P0C1S8 567 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 CDC25BP30305 580 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 DUOXA2Q1HG44 320 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 IL10P22301 178 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 TFDP2Q14188 446 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 SNF8Q96H20 258 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 SYNGAP1Q96PV0 1343 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 F5H6K3 240 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 KLRC3Q07444 240 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 MYCBPQ99417 103 aaPredicted RBP17.14■□□□□ 0.33
RGP1-201ENST00000378078 DBR1Q9UK59 544 aaKnown RBP17.14■□□□□ 0.33
RGP1-201ENST00000378078 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
RGP1-201ENST00000378078 STAT5BP51692 787 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 MED21Q13503 144 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 FBXO40Q9UH90 709 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 KCNQ2O43526 872 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 LZTS3O60299 673 aaPredicted RBP17.13■□□□□ 0.33
RGP1-201ENST00000378078 TBXAS1P24557 533 aaPredicted RBP17.13■□□□□ 0.33
RGP1-201ENST00000378078 NAGPAQ9UK23 515 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 PLOD1Q02809 727 aaPredicted RBP17.13■□□□□ 0.33
RGP1-201ENST00000378078 GALNTL6Q49A17 601 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 CEP72Q9P209 647 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 KRT77Q7Z794 578 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 RSPH9Q9H1X1 276 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms